Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caligus_20rogercresseyi_20[genbank_20GCA_5F001005385.1_202015-05-08] 288,616 sequences; 398,147,594 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq191643 84.2 3e-11 >seq191643 Length=905 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 977 AGGGAAGTAGCTCAGCAGGCAGAGCGCTGGTCTCCAAAACCAGATGTCGCAGGTTCGATT 1036 |||| |||||||||| || |||||| ||||||||||||| |||||| |||||||||| Sbjct 258 AGGGGTGTAGCTCAGCTGGTAGAGCGTCGGTCTCCAAAACCGAATGTCGTAGGTTCGATT 317 Query 1037 CCTGTCTTCCCTGCCA 1052 ||| || |||||||| Sbjct 318 CCTATCGCCCCTGCCA 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780533872128000