Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq91934 132 5e-26
>seq91934
Length=4437
Score = 132 bits (146), Expect = 5e-26
Identities = 393/601 (65%), Gaps = 10/601 (2%)
Strand=Plus/Minus
Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857
||| ||||||||||| ||||||| |||| |||| || ||||| || || | | ||
Sbjct 3565 ATCAGCTACAAATTCAATATATTCCGACATCAATTTACAATTCATGCCAATCAAATTGAC 3506
Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917
|| | |||||| || || || ||| || || || |||||| | || || |
Sbjct 3505 GGGCAAAGCTTCGGTTAAGAACTCTTGTTCAATTTTTACAGCTTCCGTTATTATTTCGGT 3446
Query 16918 AACTCGTTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAG-ACATGCGAAA 16972
| || || || ||||| ||||| ||| |||||||||||| | ||| || |||
Sbjct 3445 TATTCTCTCACGGCTGGGACGTTGTAT---TAA-ATGTTTAAACATTAACACA-GCAAAA 3391
Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032
|| |||||||| |||||||| | || | || || || ||||| | || |||||
Sbjct 3390 TCACAATGTAAACCCTCGTCACGAGAAATCAACTCATTGGAGAATGTAAGGCCAGGCATA 3331
Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092
|| |||||||||| ||||||||||| || || ||| ||||| || |||||
Sbjct 3330 AGACCACGTTTCTTTAGCCAAAATATCGAAGCAAAACTGCCACTGAAGAAAATGCCCTCC 3271
Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152
|| | ||||| || || | ||||| | | | || ||| | |||||| |
Sbjct 3270 ACAGCGGCAAATGCAATAATGCGTTCACCAAAATTGGCCGATTTTGAGCCAATCCAAGAC 3211
Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTC 17212
|||| ||||| || |||| | ||||||||| ||||| ||||| | |
Sbjct 3210 ATTGCCCAATCGGCCTTGCGCTTAACAGCTGGCATCGTTTCAATGGCATTAAAGAGATAA 3151
Query 17213 TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272
|| || | | || | || || | ||||| | | || |||||||| ||||||
Sbjct 3150 TCGCGTTGTTCGCGATCTTTAATGTAGCTGTCGATCAAAATACTATACATTTCAGAGTGT 3091
Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332
| || |||||||| || || || || || || || || || || | | ||| || ||
Sbjct 3090 ACATTTTCCATGGCAATTTGGAAACCATAGAAACAGCGTGCCTCTGTAACTTGTACCTCT 3031
Query 17333 ACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCC 17392
| | || ||||| | |||||||| || || || || ||| || || || || |||
Sbjct 3030 TGGGAAAAACGTTCAACAAGATTTTCATTGACAATACCATCGGAAGCAGCAAAGAAGGCC 2971
Query 17393 A 17393
|
Sbjct 2970 A 2970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516267844606800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |