Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq186851 104 3e-17
seq137565 102 9e-17
seq61366 102 9e-17
seq140220 100 3e-16
seq139936 100 3e-16
seq95733 100 3e-16
seq64788 100 3e-16
seq38282 100 3e-16
seq138662 98.7 1e-15
seq35688 98.7 1e-15
seq60626 96.9 4e-15
seq37893 96.9 4e-15
seq5851 96.9 4e-15
seq185244 95.1 1e-14
seq175424 93.3 5e-14
seq40071 93.3 5e-14
>seq186851
Length=1651
Score = 104 bits (114), Expect = 3e-17
Identities = 74/85 (87%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113
|| ||||| |||||| || | |||||| |||||| ||||||||||||||||||||| |
Sbjct 975 ATAAAAAAAATTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 1034
Query 60114 TACTCACCACTATACTACCGAGGAT 60138
||||||||||||||||| |||||||
Sbjct 1035 TACTCACCACTATACTATCGAGGAT 1059
>seq137565
Length=1157
Score = 102 bits (112), Expect = 9e-17
Identities = 74/85 (87%), Gaps = 3/85 (4%)
Strand=Plus/Minus
Query 60057 AAAAATT---TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113
||||||| |||||| || | |||||| |||||| ||||||||||||||||||||| |
Sbjct 929 AAAAATTGTATTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 870
Query 60114 TACTCACCACTATACTACCGAGGAT 60138
||||||||||||||||| |||||||
Sbjct 869 TACTCACCACTATACTATCGAGGAT 845
>seq61366
Length=1478
Score = 102 bits (112), Expect = 9e-17
Identities = 70/79 (89%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 60060 AATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 60119
|||| ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||
Sbjct 681 AATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCA 622
Query 60120 CCACTATACTACCGAGGAT 60138
||||||||||| |||||||
Sbjct 621 CCACTATACTATCGAGGAT 603
>seq140220
Length=1645
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 185 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 126
Query 60125 ATACTACCGAGGATT 60139
|||||| ||||||||
Sbjct 125 ATACTATCGAGGATT 111
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 775 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 716
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 715 ATACTATCGAGGAT 702
>seq139936
Length=1620
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 185 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 126
Query 60125 ATACTACCGAGGATT 60139
|||||| ||||||||
Sbjct 125 ATACTATCGAGGATT 111
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 702 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 643
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 642 ATACTATCGAGGAT 629
>seq95733
Length=2222
Score = 100 bits (110), Expect = 3e-16
Identities = 72/83 (87%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||
Sbjct 970 AAAAAACATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 911
Query 60117 TCACCACTATACTACCGAGGATT 60139
|||||||||||||| ||||||||
Sbjct 910 TCACCACTATACTATCGAGGATT 888
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 162 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 103
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 102 ATACTATCGAGGAT 89
>seq64788
Length=4825
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
|||||| ||||| || | ||| ||||||||||||||||||||| | || ||| || |
Sbjct 176 ACGCAATACCAAGTGGAGAGTGGACTCCTTTTGAATATTGTAATCGGACAAAGTACGGCC 235
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || | ||||||||| ||||| || | || |||||||| | || | | |||||
Sbjct 236 ATCTTCCAACTGCTTACCGGCGAAGATCAAACGTTGCTGGTCTGGGGGAATACCTTCCTT 295
Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
||| ||| |||| | ||| | | | | ||||| | ||| || || | ||||
Sbjct 296 ATCC-TGAATTTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACTTCCAAGGTGA 354
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183
|||||||||| || | ||||| || || || |||||
Sbjct 355 TGGTTTTGCCAGTCAAGGTCTTAACGAAAATCTGCAT 391
Score = 100 bits (110), Expect = 3e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025
||||| || |||||||||||||| || ||||| ||||||||||||| || || |||
Sbjct 1826 AAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTGTAATCAGACAATGTGCGC 1885
Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085
|||| || | || ||||| ||||| || | || || || || | || | | |||
Sbjct 1886 CCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGGGATTCCTTCC 1945
Query 43086 TTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 43144
|||| | ||| |||| | ||| | | | | || ||| | || || || | ||
Sbjct 1946 TTGT-CTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAGGT 2004
Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183
|||||||||||| || | ||||| ||||||||||||||
Sbjct 2005 GATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 2043
>seq38282
Length=1633
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 133 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 74
Query 60125 ATACTACCGAGGATT 60139
|||||| ||||||||
Sbjct 73 ATACTATCGAGGATT 59
>seq138662
Length=2599
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 492 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 433
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 432 ATACTATCGAGGAT 419
>seq35688
Length=3808
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 3061 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 3120
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 3121 ATACTATCGAGGAT 3134
>seq60626
Length=1529
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1291 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1350
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 1351 TACTATCGAGGAT 1363
>seq37893
Length=2337
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1306 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1365
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 1366 TACTATCGAGGAT 1378
>seq5851
Length=1034
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 149 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 90
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 89 TACTATCGAGGAT 77
>seq185244
Length=4071
Score = 95.1 bits (104), Expect = 1e-14
Identities = 75/90 (83%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 3531 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 3472
Query 60125 ATACTACCGAGGATTGAATATATAACTTGA 60154
|||||| ||||||| || | ||| ||||
Sbjct 3471 ATACTATCGAGGATGTTATGTGTAATTTGA 3442
>seq175424
Length=1535
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 906 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 847
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 846 ATACTATCGAGGAT 833
>seq40071
Length=1725
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1121 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1062
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 1061 ATACTATCGAGGAT 1048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570405853822800
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