Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq186851 104 3e-17 seq137565 102 9e-17 seq61366 102 9e-17 seq140220 100 3e-16 seq139936 100 3e-16 seq95733 100 3e-16 seq64788 100 3e-16 seq38282 100 3e-16 seq138662 98.7 1e-15 seq35688 98.7 1e-15 seq60626 96.9 4e-15 seq37893 96.9 4e-15 seq5851 96.9 4e-15 seq185244 95.1 1e-14 seq175424 93.3 5e-14 seq40071 93.3 5e-14 >seq186851 Length=1651 Score = 104 bits (114), Expect = 3e-17 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| |||||| || | |||||| |||||| ||||||||||||||||||||| | Sbjct 975 ATAAAAAAAATTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 1034 Query 60114 TACTCACCACTATACTACCGAGGAT 60138 ||||||||||||||||| ||||||| Sbjct 1035 TACTCACCACTATACTATCGAGGAT 1059 >seq137565 Length=1157 Score = 102 bits (112), Expect = 9e-17 Identities = 74/85 (87%), Gaps = 3/85 (4%) Strand=Plus/Minus Query 60057 AAAAATT---TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 ||||||| |||||| || | |||||| |||||| ||||||||||||||||||||| | Sbjct 929 AAAAATTGTATTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 870 Query 60114 TACTCACCACTATACTACCGAGGAT 60138 ||||||||||||||||| ||||||| Sbjct 869 TACTCACCACTATACTATCGAGGAT 845 >seq61366 Length=1478 Score = 102 bits (112), Expect = 9e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60060 AATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 60119 |||| ||||| || | |||||| |||||| ||||||||||||||||||||| ||||||| Sbjct 681 AATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCA 622 Query 60120 CCACTATACTACCGAGGAT 60138 ||||||||||| ||||||| Sbjct 621 CCACTATACTATCGAGGAT 603 >seq140220 Length=1645 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 185 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 126 Query 60125 ATACTACCGAGGATT 60139 |||||| |||||||| Sbjct 125 ATACTATCGAGGATT 111 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 775 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 716 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 715 ATACTATCGAGGAT 702 >seq139936 Length=1620 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 185 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 126 Query 60125 ATACTACCGAGGATT 60139 |||||| |||||||| Sbjct 125 ATACTATCGAGGATT 111 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 702 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 643 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 642 ATACTATCGAGGAT 629 >seq95733 Length=2222 Score = 100 bits (110), Expect = 3e-16 Identities = 72/83 (87%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 970 AAAAAACATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 911 Query 60117 TCACCACTATACTACCGAGGATT 60139 |||||||||||||| |||||||| Sbjct 910 TCACCACTATACTATCGAGGATT 888 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 162 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 103 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 102 ATACTATCGAGGAT 89 >seq64788 Length=4825 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| ||||| || | ||| ||||||||||||||||||||| | || ||| || | Sbjct 176 ACGCAATACCAAGTGGAGAGTGGACTCCTTTTGAATATTGTAATCGGACAAAGTACGGCC 235 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | ||||||||| ||||| || | || |||||||| | || | | ||||| Sbjct 236 ATCTTCCAACTGCTTACCGGCGAAGATCAAACGTTGCTGGTCTGGGGGAATACCTTCCTT 295 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| |||| | ||| | | | | ||||| | ||| || || | |||| Sbjct 296 ATCC-TGAATTTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACTTCCAAGGTGA 354 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183 |||||||||| || | ||||| || || || ||||| Sbjct 355 TGGTTTTGCCAGTCAAGGTCTTAACGAAAATCTGCAT 391 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 42966 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 43025 ||||| || |||||||||||||| || ||||| ||||||||||||| || || ||| Sbjct 1826 AAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTGTAATCAGACAATGTGCGC 1885 Query 43026 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCC 43085 |||| || | || ||||| ||||| || | || || || || | || | | ||| Sbjct 1886 CCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGGGATTCCTTCC 1945 Query 43086 TTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 43144 |||| | ||| |||| | ||| | | | | || ||| | || || || | || Sbjct 1946 TTGT-CTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAGGT 2004 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAt 43183 |||||||||||| || | ||||| |||||||||||||| Sbjct 2005 GATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 2043 >seq38282 Length=1633 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 133 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 74 Query 60125 ATACTACCGAGGATT 60139 |||||| |||||||| Sbjct 73 ATACTATCGAGGATT 59 >seq138662 Length=2599 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 492 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 433 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 432 ATACTATCGAGGAT 419 >seq35688 Length=3808 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||| Sbjct 3061 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 3120 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 3121 ATACTATCGAGGAT 3134 >seq60626 Length=1529 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1291 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1350 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 1351 TACTATCGAGGAT 1363 >seq37893 Length=2337 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1306 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1365 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 1366 TACTATCGAGGAT 1378 >seq5851 Length=1034 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct 149 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 90 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 89 TACTATCGAGGAT 77 >seq185244 Length=4071 Score = 95.1 bits (104), Expect = 1e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3531 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 3472 Query 60125 ATACTACCGAGGATTGAATATATAACTTGA 60154 |||||| ||||||| || | ||| |||| Sbjct 3471 ATACTATCGAGGATGTTATGTGTAATTTGA 3442 >seq175424 Length=1535 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 906 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 847 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 846 ATACTATCGAGGAT 833 >seq40071 Length=1725 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1121 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1062 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 1061 ATACTATCGAGGAT 1048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570405853822800