Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq64788 109 4e-19
>seq64788
Length=4825
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
|||||| | ||| | ||||||||| |||| || || || || || ||||| ||
Sbjct 1816 GCCACCACGCAAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTGTAATCAGA 1875
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| | ||| |||| |||| |||||| |||||||| ||||| || ||||| || |||||
Sbjct 1876 CAATGTGCGCCCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGG 1935
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| || |||||||| |||||| ||||| | | | || | ||| ||
Sbjct 1936 GATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAAC 1995
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||| || || ||||| |||| ||||| ||||||||||||||
Sbjct 1996 CTCCAAGGTGATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 2043
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
||||||||||| || ||| |||||| ||||| ||||| ||| || || | ||
Sbjct 180 AATACCAAGTGGAGAGTGGACTCCTTTTGAATATTGTAATCGGACAAAGTACGGCCATCT 239
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|||| || || |||||||| ||||| || || ||||| || || | ||| ||||| |||
Sbjct 240 TCCAACTGCTTACCGGCGAAGATCAAACGTTGCTGGTCTGGGGGAATACCTTCCTTATCC 299
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
|||||| ||||| | | | |||| || || |||| ||| || ||
Sbjct 300 TGAATTTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACTTCCAAGGTGATGGTT 359
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| |||| ||||| || || || |||||
Sbjct 360 TTGCCAGTCAAGGTCTTAACGAAAATCTGCAT 391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394124193497710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |