Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq64788 114 1e-20 >seq64788 Length=4825 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || ||||| ||||| || || ||||| || ||| | || || ||| | | Sbjct 1587 ATGCAGATTTTCGTTAAGACCTTGACAGGAAAAACAATTACCTTAGAAGTTGAACCATCC 1528 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| ||| |||| |||||| | |||||||| | || || || Sbjct 1527 GACACTATTGAAAATGTAAAGGCCAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 1468 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||||||||| | || || |||||| |||||||| || || |||||||| | Sbjct 1467 CAACGTTTAATCTTCGCTGGTAAACAATTGGAAGATGGACGTACATTGTCCGATTACAAC 1408 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || || || ||| | || |||||||| || ||||| | ||||| ||| Sbjct 1407 ATTCAAAAGGAGTCTACCCTTCATTTGGTCTTACGTCTCCGCGGTGGT 1360 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || ||||| ||||| || |||||||| || ||| | || || ||| | Sbjct 391 ATGCAGATTTTCGTTAAGACCTTGACTGGCAAAACCATCACCTTGGAAGTTGAACCATCT 332 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | |||| |||||| | |||||| | || ||||| | || |||||| Sbjct 331 GACACCATTGAAAATGTTAAAGCTAAAATTCAGGATAAGGAAGGTATTCCCCCAGACCAG 272 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||||| || | || || || || |||||||| | ||| || |||||||| Sbjct 271 CAACGTTTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGTACTTTGTCCGATTACAAT 212 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACG 25046 || || || ||| |||| || || || || || || Sbjct 211 ATTCAAAAGGAGTCCACTCTCCACTTGGTATTGCG 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417297078219200