Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq91934 107 4e-18
>seq91934
Length=4437
Score = 107 bits (118), Expect = 4e-18
Identities = 237/353 (67%), Gaps = 7/353 (2%)
Strand=Plus/Plus
Query 101901 ATTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCAT 101960
|||| | |||| ||| |||| ||||| || || || || || ||||| ||||| |
Sbjct 3237 ATTTTGGTGAACGCATTATTGCATTTGCCGCTGTGGAGGGCATTTTCTTCAGTGGCAGTT 3296
Query 101961 TCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATG 102020
| || || || || ||| | ||||| | ||| || ||||||| || || | ||||||||
Sbjct 3297 TTGCTTCGATATTTTGGCTAAAGAAACGTGGTCTTATGCCTGGCCTTACATTCTCCAATG 3356
Query 102021 AGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGG 102080
|||| |||||| | ||||| ||| | ||| | || ||||| | |||| ||| |
Sbjct 3357 AGTTGATTTCTCGTGACGAGGGTTTACATTGTGATTTTGCTGTGTTAATGTTTAAACA-- 3414
Query 102081 GTTTTGTTGATAC--CCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCG 102138
||| | || |||| | | || || || ||||| | || ||||| ||
Sbjct 3415 --TTTAATACAACGTCCCAGC-CGTGAGAGAATAACCGAAATAATAACGGAAGCTGTAAA 3471
Query 102139 AATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAA 102198
|||||||||||| || | || | | |||| || || || | || ||||| || ||
Sbjct 3472 AATTGAACAAGAGTTCTTAACCGAAGCTTTGCCCGTCAATTTGATTGGCATGAATTGTAA 3531
Query 102199 GTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGG 102251
|||||| | || ||||||||||| || ||| | || |||||| |||
Sbjct 3532 ATTGATGTCGGAATATATTGAATTTGTAGCTGATCGTTTGTTAGTTGAATTGG 3584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 987079761822050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |