Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq41982 352 3e-92
seq91934 239 4e-58
>seq41982
Length=5201
Score = 352 bits (390), Expect = 3e-92
Identities = 1191/1837 (65%), Gaps = 26/1837 (1%)
Strand=Plus/Minus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|| || || |||| ||||| ||||| ||| | |||||| |||| ||||||||| || ||
Sbjct 3360 TCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCCGGTC 3301
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|||| || | |||| | || ||||| || ||||| ||| |||| | || | |
Sbjct 3300 TTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGGTTCA 3241
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
| | || ||| | | || ||||||||||| || || || || | ||||||||||||
Sbjct 3240 GCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGCCATT 3181
Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029
| | | | || || ||||||||||| || ||||||| | |||| | |
Sbjct 3180 TGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATCTT-T 3122
Query 37030 GGTAA----ATCTAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTC 37085
|| || ||||| ||| ||||| || || | | |||| | || || || ||
Sbjct 3121 GGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTCATTTC 3062
Query 37086 ATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAA 37145
| || ||| | || | ||| ||| | | | || |||| |||| | ||
Sbjct 3061 GTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATATTGAA 3002
Query 37146 ATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATT 37205
||||| |||| || | ||| ||||| |||||| ||||| || |||| || |||||
Sbjct 3001 TTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGATTCATT 2942
Query 37206 ATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCT 37265
||| | || ||||| | ||||| ||||| ||||| || || | ||| | |||||
Sbjct 2941 ATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAATTTCG 2882
Query 37266 CAATCCATG-TGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGT 37324
| ||||| ||| || ||| ||| ||| | || |||| | ||| ||||| || ||
Sbjct 2881 TACACCATGCTGT-TTGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTAGGAG 2823
Query 37325 TCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCT 37384
| || ||||||||| |||||||| || || ||||| | || | || ||| || |
Sbjct 2822 TTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGATAAGTTT 2763
Query 37385 CATAAGGTCCGTAAATTTTAGCT-AGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443
||||||| || || |||| | | ||| ||||||| ||| | |||| ||||||| ||
Sbjct 2762 CATAAGGACC-TAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATAATAAATA 2704
Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT 37503
||||||||||||||| |||||| | || | |||||| ||| | | | | || |
Sbjct 2703 GTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAAACGCATT 2644
Query 37504 AATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTA 37563
|| || || || || | |||||| ||||| || || || || | ||| ||||
Sbjct 2643 AAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGATTA 2584
Query 37564 GATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTA 37623
||| | | || || |||||| | || || ||||| ||||| || ||||||||
Sbjct 2583 GATTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGATTTTTG 2524
Query 37624 ACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTTATTA---TTAACA 37680
| | ||| |||| || | || || | || ||| || | | | |||
Sbjct 2523 GTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGTTTTTTCAGGCGTCACA 2464
Query 37681 AATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAAT 37740
|| || | | | || || | | |||||| || || | ||||| | | | |||
Sbjct 2463 AACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCATC--GGGTGCGGAAT 2406
Query 37741 --TGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGG 37798
| || ||| || ||||| | ||||| | |||| || || | ||| || ||
Sbjct 2405 ACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCAATATTTTGCTGGTTAC 2346
Query 37799 ATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCT 37858
|| |||||| | ||| || || | || || || || ||| ||||| |||||| |
Sbjct 2345 TCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTTCTACTTGAGCTT 2286
Query 37859 CGATAATAGATTTCCATAAACTTCTTGCTTTAACGAT-CGCTTTAAttt-ttttCTTTGT 37916
| || || | ||| | | || || ||| | || ||| ||| ||| | |
Sbjct 2285 CAATTATGGCAAACCAAAGAGCCTGGGCCTTGACGGTACGGTTTGCTTTGCCTTCAT--T 2228
Query 37917 TTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATC--GCATAATCCTGGA 37974
||| || | |||| |||| | || || ||||| || || ||| | || |||
Sbjct 2227 TTCATACTTGGTATACAATTCTTCGAATTCCGCACCCCAAACTTCCTGCAGA--CCAGGA 2170
Query 37975 CATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAA 38034
|||| | |||||||||| ||||| ||| ||| || |||||| | || |||||| |||
Sbjct 2169 CATTTGTGGGGACACATTAACGACCAATCTCCATTTTCTTCTACTCTTTTCATAAACAAA 2110
Query 38035 TCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTC 38094
|| |||| ||| | ||| |||| |||| | | ||| | ||||| || || |||
Sbjct 2109 TCGGGTATCCACAGGGCATAGAATAGATCTCTAGCTCTGTGCTCTTCCTTGCCGGTATTT 2050
Query 38095 TTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATT 38154
|| |||| | ||| || || ||||| | ||||| || || | |||||| | | |
Sbjct 2049 TTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATGGCAAAT 1990
Query 38155 GCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTT 38214
|||||||| | ||| | || || |||| | ||| | | || ||| | | ||
Sbjct 1989 GCTCCTGGACGTTTGCCGCCGCCTTGATCTACATAGCGGGCAACATTGTTAAACACCCTA 1930
Query 38215 AACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCT 38274
| ||| || || | ||||| || ||||||| |||| || |||| ||||| ||
Sbjct 1929 AGCATGGGCACCAGTCCATTTGAGGTGCCGTTAGTACCATCGATGGAAGTGCCCTTGGCC 1870
Query 38275 CGTATATTACTTATCGACAAT-CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTG 38333
| ||| | | || ||| || || ||||| ||| ||| || || | ||||||||
Sbjct 1869 CTTAT-GCAGTGCACGTTAATGCCAATACCACCAGCAGATTTGGAAATCATGGCGCATTG 1811
Query 38334 TTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACT 38393
|| | | | || |||||||| ||| ||| || || | | | || ||
Sbjct 1810 TTCCACTGACTTGAAAATACCTTCAATAGAATCAGCCACCATGGTCAAAAGGAAGCACGA 1751
Query 38394 AGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCA 38453
|||| ||| || || || | || ||| || || || || |||||| | || |
Sbjct 1750 TGACAATTGTGGTCGCGGGGTAGCAGCAGCAAACAAAGTGGGCGAGGCATGTGTAAAATA 1691
Query 38454 TTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACC 38513
|| ||||| | ||||| ||||| || | |||||| ||| | || || |||||
Sbjct 1690 ACGCTCAGACAACAAGTTATAAGTTTCGATGGCCGAATCTATGTCATCTCCATGTATACC 1631
Query 38514 TAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAG 38573
|| || ||| ||||||| |||||| ||||||||||| | || ||| |||| ||| ||
Sbjct 1630 TATAGCTACTCTCATTAACATATGCTGTGGTCTTTCAACAATCTTACCATTCATTTTCAG 1571
Query 38574 TAGATACGATTTTTCTAATGTTTTTATTCCAAAATAA 38610
| ||| ||| | || | ||| || | ||||||||||
Sbjct 1570 CAAATAGGATCTCTCCAGTGTCTTGAATCCAAAATAA 1534
>seq91934
Length=4437
Score = 239 bits (264), Expect = 4e-58
Identities = 482/704 (68%), Gaps = 17/704 (2%)
Strand=Plus/Minus
Query 11455 TAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTAT 11514
||| || | ||| || || ||||| ||||| | ||||| || ||||||||| || ||
Sbjct 3574 TAACAAACGATCAGCTACAAATTCAATATATTCCGACATCAATTTACAATTCATGCCAAT 3515
Query 11515 AAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGAT 11574
| || || || | ||| | || || ||||| | ||| || || || || || | ||
Sbjct 3514 CAAATTGACGGGCAAAGCTTCGGTTAAGAACTCTTGTTCAATTTTTACAGCTTCCGTTAT 3455
Query 11575 TATCGACGTTATAACTTCCTTAGATGGTG-GATGTAATAAATGTTTAAACATTAAACAC- 11632
||| ||||| || | | ||| | |||| |||||||||||||||||| |||
Sbjct 3454 TATTTCGGTTATT-CTCTCACGGCTGGGACGTTGTATTAAATGTTTAAACATTAA-CACA 3397
Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692
|||||||||||||||||||| ||||| | | || | ||||| || ||||| | ||
Sbjct 3396 GCAAAATCACAATGTAAACCCTCGTCACGAGAAATCAACTCATTGGAGAATGTAAGGCCA 3337
Query 11693 GGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATT 11752
||||| | || ||||| |||| ||||||||| | |||||| ||| ||||| ||
Sbjct 3336 GGCATAAGACCACGTTTCTTTAGCCAAAATATCGAAGCAAAACTGCCACTGAAGAAAATG 3277
Query 11753 CCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA--TACCTTGTTGCTAG-ATATC 11809
||||||||||| |||||||| | | | ||| ||| | | | || || |||
Sbjct 3276 CCCTCCACAGCGGCAAATGCAATAATGCGTTCACCAAAATTGGCCGATTTTGAGCCAATC 3217
Query 11810 CATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAAT 11869
|| | |||||||| || || || || | ||| ||||| || || |||||
Sbjct 3216 CAAGACATTGCCCAATCGGCCTTGCGCTTAACAGCTGGCATCGTTTCAATGGCATTAAAG 3157
Query 11870 A---AATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATT 11926
| ||| || ||| |||| | | || | || || || | ||||||||||
Sbjct 3156 AGATAATCGCGTTGTTC---GCGATCTTTAATGTAGCTGTCGATCAAAATACTATACATT 3100
Query 11927 TCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC 11986
|| || || | ||||||||| || ||||| || ||||||||||| |||||||||| |
Sbjct 3099 TCAGAGTGTACATTTTCCATGGCAATTTGGAAACCATAGAAACAGCGTGCCTCTGTAACT 3040
Query 11987 TGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCA 12046
||||| || |||| | ||| | | ||| ||||| ||||||||||| || |||
Sbjct 3039 TGTACCTCTTGGGAAAAACGTTCAACAAGATTTTCATTGACAATACCATCGGAAGCAGCA 2980
Query 12047 AAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAATCA 12106
|| || || || | |||| |||||||| || | | || | ||| ||||| ||
Sbjct 2979 AAGAAGGCCAGAACATGTGAGATAAAGTAACGCTCATTGTCGGTGAGTTTTTCCCAGTC- 2921
Query 12107 TCTAA--ATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAA 12148
| || |||||| || | |||||||||||| || |||||||||
Sbjct 2920 -CGAATTATCTTTAGAGAGATCTACTTCTTCTACAGTCCAAAAA 2878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 467368070834400
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