Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq41982 621 5e-173 seq91934 309 4e-79 seq39385 89.7 7e-13 >seq41982 Length=5201 Score = 621 bits (688), Expect = 5e-173 Identities = 1515/2275 (67%), Gaps = 24/2275 (1%) Strand=Plus/Minus Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766 |||| |||| || ||||| || | | | ||| ||||| || | | ||| ||||| | Sbjct 3365 CCTTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGC 3306 Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826 | || |||| || |||| | |||||||| || || | ||| || | | Sbjct 3305 CGGTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGG 3246 Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886 | || || | ||| ||||| | || ||||||||||||||||| || || | || || | Sbjct 3245 GTTCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTG 3186 Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATA 78945 |||||| || | ||||| | ||| ||||||| || ||||| | || | |||| Sbjct 3185 CCATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACG-AATA 3127 Query 78946 TCTTCTGGAAGGTT-TGTATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002 |||| |||| | | ||| || || || || | || | ||||| || || || Sbjct 3126 TCTTTGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTC 3067 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062 || || |||| ||||| | | || |||||| || | || | ||| |||| || | Sbjct 3066 ATTTCGTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATA 3007 Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 | |||||||| || | || | | || |||||||| |||||| || || | ||| Sbjct 3006 TTGAATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGAT 2947 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 |||||||| ||||| ||||| || || || || || |||||||| |||| | ||| | Sbjct 2946 TCATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAA 2887 Query 79183 TTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGAC 79242 |||| | ||| | | ||||||| ||||| | | ||| | ||| | ||| | Sbjct 2886 TTTCGTACACCATGCTGTTTGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTA 2827 Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 || |||||| | ||| |||||||| || || ||||| | | || | || Sbjct 2826 GGAGTTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGATAA 2767 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 ||||||||||| ||| |||||||| ||||||||||| || || ||||| || |||||| Sbjct 2766 GTTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATAATAA 2707 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 || ||||||||||| | | ||| | || | | ||| || | || || Sbjct 2706 ATAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAAACGC 2647 Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482 | | ||| || | ||| || | || || ||||| || || ||||| | ||| | | Sbjct 2646 ATTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGA 2587 Query 79483 TTAGAAATTTCA--GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 79540 ||||| |||| || || || | ||||||| | ||||| ||||| ||||| ||||||| Sbjct 2586 TTAGA--TTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGAT 2529 Query 79541 TCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA--- 79597 | || || ||||| |||| |||| ||| ||| || ||| | || Sbjct 2528 TTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGTTTTTTCAGGCG 2469 Query 79598 TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 79657 | |||||||| || | || | || |||| |||||| ||||||| ||||| | | | Sbjct 2468 TCACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCATCGGGTGCGG 2409 Query 79658 CATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGAT 79717 ||| | || ||||| || || | |||||| |||||||| || || | |||||| || | Sbjct 2408 AATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCAATATTTTGCTGGT 2349 Query 79718 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAG 79777 ||||||| ||||| |||||||| || | ||| | |||||||| ||||| | |||| Sbjct 2348 TACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTTCTACTTGAG 2289 Query 79778 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTC 79837 ||| || || || ||| | | | ||||| | || || | | ||| Sbjct 2288 CTTCAATTATGGCAAACCAAAGAGCCTGGGCCTTGACGGTACGGTTTGCTTTGCCTTCAT 2229 Query 79838 TTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGAC 79897 |||| || | ||||| ||| |||||| || | |||||||| || | | ||||||| Sbjct 2228 TTTCATACTTGGTATACAATTCTTCGAATTCCGCACCCCAAACTTCCTGCAGACCAGGAC 2169 Query 79898 ATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGAT 79957 ||| || |||||||| |||||||| ||||||| || | ||||| ||||||||| | || Sbjct 2168 ATTTGTGGGGACACATTAACGACCAATCTCCATTTTCTTCTACTCTTTTCATAAACAAAT 2109 Query 79958 CAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTC 80016 | || ||||| || || ||| ||||||||||| | ||| ||||| || || || ||||| Sbjct 2108 CGGGTATCCACAGGGC-ATAGAATAGATCTCTAGCTCTGTGCTCTTCCTTGCCGGTATTT 2050 Query 80017 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 80076 || || | ||| | || | | |||||| |||||||| || ||||| || ||||| | Sbjct 2049 TTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATGGCAAAT 1990 Query 80077 ACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 80136 |||| || |||||| || || ||||||| || | || || ||| | || || Sbjct 1989 GCTCCTGGACGTTTGCCGCCGCCTTGATCTACATAGCGGGCAACATTGTTAAACACCCTA 1930 Query 80137 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCA 80196 | ||| || | | ||||| || || || || || || ||| | | || |||| Sbjct 1929 AGCATGGGCACCAGTCCATTTGAGGTGCCGTTAGTACCATCGATGGAAGTGCCCTTGGCC 1870 Query 80197 CGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 80254 | || | | | || || || || || || || ||| || || | |||||| Sbjct 1869 CTTATGCAGTGCACGTTAATG--CCAATACCACCAGCAGATTTGGAAATCATGGCGCATT 1812 Query 80255 GTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGC 80314 ||| | | | | || || || || |||| | | |||| | | || || || Sbjct 1811 GTTCCACTGACTTGAAAATACCTTCAATAGAATCAGCCACCATGGTCAAAAGGAAGCACG 1752 Query 80315 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 80374 |||| ||| | || || | ||| ||| || || || || || || ||||| Sbjct 1751 ATGACAATTGTGGTCGCGGGGTAGCAGCAGCAAACAAAGTGGGCGAGGCATGTGTAAAAT 1692 Query 80375 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTC 80434 | ||||||| | || || || || || || || ||||| || | ||| || | Sbjct 1691 AACGCTCAGACAACAAGTTATAAGTTTCGATGGCCGAATCTATGTCATCTCCATGTATAC 1632 Query 80435 CTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 80494 ||| || || | ||||||||| ||||| ||||||||||| ||||| ||| ||||||| Sbjct 1631 CTATAGCTACTCTCATTAACATATGCTGTGGTCTTTCAACAATCTTACCATTCATTTTCA 1572 Query 80495 ACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 80554 ||| || ||| | |||| || || || |||||||| ||||| |||||| || || | Sbjct 1571 GCAAATAGGATCTCTCCAGTGTCTTGAATCCAAAATAATTGTAGCCAAAGTCACGATCAT 1512 Query 80555 AAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACT-T 80613 ||||||| ||| || | || || || | || |||| | |||||||| Sbjct 1511 AAATAATGGACGAATTCAAACGTTCTGCATTCTTCTGCACCACAT-TGTAGTGATACTCC 1453 Query 80614 GAAATAATCGGAGAA-TGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCAT 80672 ||||| || || ||| | || ||| | | | | |||||||| | | | ||| || Sbjct 1452 GAAATCATGGGCGAAGTTTTACCCGTCTCTTTG-TTAACATAATGATACAGATCACTTAT 1394 Query 80673 CACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGC 80732 || || ||||| |||||| ||||||||||| | ||| || ||||| || | || || Sbjct 1393 AACCTCTGAAAATACTTTTTTCGTTTCCTTGTGCAAATTGGAGACGGCAATACGAGCCGC 1334 Query 80733 TAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGT 80792 || ||||||||||| ||| | ||| || | || || ||| | |||||||||| | | Sbjct 1333 CAATATGGCATAATCACCATGATTTGTTGTCAATGTAGCAGCTGTCTCGGCTGCCAAATT 1274 Query 80793 GTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTT 80852 |||||| ||| ||||| || ||| |||| || | |||||| |||| | || Sbjct 1273 GTCCAACTCTTGAGTTGTAACACCACAGTATAAGCCATTGATAACTTTCAGTGTAATGGC 1214 Query 80853 AATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGAT 80912 | || || | | ||| | ||||| ||||| || | ||| ||||||||| || || Sbjct 1213 CACTGGGTCAACAAAATCCATATTTAATCCATAGCAAAGCTTTTGAATACGAGATGTAAT 1154 Query 80913 TTTATCAAACATG-ACATTTTCCTTGTATCCATTTCGTTTAATGACAAACATTTT 80966 |||||| || ||| || | || ||| |||| |||||||| ||||||| ||| Sbjct 1153 TTTATCGAA-ATGTACTTCCTCTTTGCGGCCATCTCGTTTAAGAACAAACAATTT 1100 >seq91934 Length=4437 Score = 309 bits (342), Expect = 4e-79 Identities = 512/730 (70%), Gaps = 23/730 (3%) Strand=Plus/Minus Query 49775 CCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834 |||||||| | ||| | ||| || |||||||| |||||| ||||| || ||||| Sbjct 3584 CCAATTCAACTAACAAACGATCAGCTACAAATTCAATATATTCCGACATCAATTTACAAT 3525 Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894 |||| || || | || || || | ||| | || | || ||||||||||| ||| | Sbjct 3524 TCATGCCAATCAAATTGACGGGCAAAGCTTCGGTTAAGAACTCTTGTTCAATTTTTACAG 3465 Query 49895 CATCTGTTATAATAGATCTAACGGTT--TCT-TCAC---TCGGTGGATGCAATAAATGTT 49948 | || ||||| || ||||| ||| |||| | || | || | |||||||| Sbjct 3464 CTTCCGTTATTATTT------CGGTTATTCTCTCACGGCTGGGACGTTGTATTAAATGTT 3411 Query 49949 TAAACATCAA-ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 ||||||| || ||| || ||||| || || | ||||||||| | | ||| | || ||| Sbjct 3410 TAAACATTAACACA-GCAAAATCACAATGTAAACCCTCGTCACGAGAAATCAACTCATTG 3352 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || || || || || ||||| || ||||| || || ||||||||||| || ||||| Sbjct 3351 GAGAATGTAAGGCCAGGCATAAGACCACGTTTCTTTAGCCAAAATATCGAAGCAAAACTG 3292 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC- 50126 ||| ||||| || || || || |||||||| |||| || | || ||| || |||| Sbjct 3291 CCACTGAAGAAAATGCCCTCCACAGCGGCAAATGCAATAATGCGTTCACCAAAATTGGCC 3232 Query 50127 GCTGTCATGT--ATCCA---CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 50181 | | | | ||||| | || |||||||||||||| || ||| |||||| Sbjct 3231 GATTTTGAGCCAATCCAAGACATT---GCCCAATCGGCCTTGCGCTTAACAGCTGGCATC 3175 Query 50182 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 50241 ||||| ||||||||||||||||| | || | | |||||||| || | |||||| Sbjct 3174 GTTTCAATGGCATTAAAGAGATAATCGCGTTGTTCGCGATCTTTAATGTAGCTGTCGATC 3115 Query 50242 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 50301 |||| |||||||||||| || || | ||||| ||||| || || || || |||||||| Sbjct 3114 AAAATACTATACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAACCATAGAAACAG 3055 Query 50302 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATT 50361 | ||||| |||| || || ||| |||| |||||| | | ||||||||| || || Sbjct 3054 CGTGCCTCTGTAACTTGTACCTCTTGGGAAAAACGTTCAACAAGATTTTCATTGACAATA 2995 Query 50362 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTT 50421 || || || ||||| || |||| |||||| ||||| | || ||| || Sbjct 2994 CCATCGGAAGCAGCAAAGAAGGCCAGAACATGTGAGATAAAGTAACGCTCATTGTCGGTG 2935 Query 50422 AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 50481 ||||| | ||| || |||||||||| | |||||||||||| || |||||||| ||| Sbjct 2934 AGTTTTTCCCAGTCCGAATTATCTTTAGAGAGATCTACTTCTTCTACAGTCCAAAAAGAT 2875 Query 50482 GCCTCTGCCT 50491 || || |||| Sbjct 2874 GCTTCAGCCT 2865 >seq39385 Length=6125 Score = 89.7 bits (98), Expect = 7e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 44990 AATACCCAATTCCTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATA 45049 ||| |||| || ||||| || |||| |||||||| ||||| || || || || | ||| Sbjct 2557 AATGCCCAGCTCTTTGACTTGGGTTAAAGATCTCCAGTCCATATTTGCACTGCCCAGATA 2616 Query 45050 AATATGTGTATTATCGGATATCCAAAATTTTGTATGAAGAACTCCTCCT 45098 ||| ||| |||| || || |||||||||||||| || | ||| |||||| Sbjct 2617 AATGTGTTTATTGTCCGAAATCCAAAATTTTGTGTGTAAAACACCTCCT 2665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716495484116400