Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq41982 621 5e-173
seq91934 309 4e-79
seq39385 89.7 7e-13
>seq41982
Length=5201
Score = 621 bits (688), Expect = 5e-173
Identities = 1515/2275 (67%), Gaps = 24/2275 (1%)
Strand=Plus/Minus
Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766
|||| |||| || ||||| || | | | ||| ||||| || | | ||| ||||| |
Sbjct 3365 CCTTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGC 3306
Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826
| || |||| || |||| | |||||||| || || | ||| || | |
Sbjct 3305 CGGTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGG 3246
Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886
| || || | ||| ||||| | || ||||||||||||||||| || || | || || |
Sbjct 3245 GTTCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTG 3186
Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATA 78945
|||||| || | ||||| | ||| ||||||| || ||||| | || | ||||
Sbjct 3185 CCATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACG-AATA 3127
Query 78946 TCTTCTGGAAGGTT-TGTATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002
|||| |||| | | ||| || || || || | || | ||||| || || ||
Sbjct 3126 TCTTTGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTC 3067
Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062
|| || |||| ||||| | | || |||||| || | || | ||| |||| || |
Sbjct 3066 ATTTCGTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATA 3007
Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122
| |||||||| || | || | | || |||||||| |||||| || || | |||
Sbjct 3006 TTGAATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGAT 2947
Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182
|||||||| ||||| ||||| || || || || || |||||||| |||| | ||| |
Sbjct 2946 TCATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAA 2887
Query 79183 TTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGAC 79242
|||| | ||| | | ||||||| ||||| | | ||| | ||| | ||| |
Sbjct 2886 TTTCGTACACCATGCTGTTTGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTA 2827
Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302
|| |||||| | ||| |||||||| || || ||||| | | || | ||
Sbjct 2826 GGAGTTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGATAA 2767
Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362
||||||||||| ||| |||||||| ||||||||||| || || ||||| || ||||||
Sbjct 2766 GTTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATAATAA 2707
Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422
|| ||||||||||| | | ||| | || | | ||| || | || ||
Sbjct 2706 ATAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAAACGC 2647
Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482
| | ||| || | ||| || | || || ||||| || || ||||| | ||| | |
Sbjct 2646 ATTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGA 2587
Query 79483 TTAGAAATTTCA--GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 79540
||||| |||| || || || | ||||||| | ||||| ||||| ||||| |||||||
Sbjct 2586 TTAGA--TTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGAT 2529
Query 79541 TCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA--- 79597
| || || ||||| |||| |||| ||| ||| || ||| | ||
Sbjct 2528 TTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGTTTTTTCAGGCG 2469
Query 79598 TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 79657
| |||||||| || | || | || |||| |||||| ||||||| ||||| | | |
Sbjct 2468 TCACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCATCGGGTGCGG 2409
Query 79658 CATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGAT 79717
||| | || ||||| || || | |||||| |||||||| || || | |||||| || |
Sbjct 2408 AATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCAATATTTTGCTGGT 2349
Query 79718 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAG 79777
||||||| ||||| |||||||| || | ||| | |||||||| ||||| | ||||
Sbjct 2348 TACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTTCTACTTGAG 2289
Query 79778 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTC 79837
||| || || || ||| | | | ||||| | || || | | |||
Sbjct 2288 CTTCAATTATGGCAAACCAAAGAGCCTGGGCCTTGACGGTACGGTTTGCTTTGCCTTCAT 2229
Query 79838 TTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGAC 79897
|||| || | ||||| ||| |||||| || | |||||||| || | | |||||||
Sbjct 2228 TTTCATACTTGGTATACAATTCTTCGAATTCCGCACCCCAAACTTCCTGCAGACCAGGAC 2169
Query 79898 ATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGAT 79957
||| || |||||||| |||||||| ||||||| || | ||||| ||||||||| | ||
Sbjct 2168 ATTTGTGGGGACACATTAACGACCAATCTCCATTTTCTTCTACTCTTTTCATAAACAAAT 2109
Query 79958 CAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTC 80016
| || ||||| || || ||| ||||||||||| | ||| ||||| || || || |||||
Sbjct 2108 CGGGTATCCACAGGGC-ATAGAATAGATCTCTAGCTCTGTGCTCTTCCTTGCCGGTATTT 2050
Query 80017 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 80076
|| || | ||| | || | | |||||| |||||||| || ||||| || ||||| |
Sbjct 2049 TTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATGGCAAAT 1990
Query 80077 ACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 80136
|||| || |||||| || || ||||||| || | || || ||| | || ||
Sbjct 1989 GCTCCTGGACGTTTGCCGCCGCCTTGATCTACATAGCGGGCAACATTGTTAAACACCCTA 1930
Query 80137 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCA 80196
| ||| || | | ||||| || || || || || || ||| | | || ||||
Sbjct 1929 AGCATGGGCACCAGTCCATTTGAGGTGCCGTTAGTACCATCGATGGAAGTGCCCTTGGCC 1870
Query 80197 CGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 80254
| || | | | || || || || || || || ||| || || | ||||||
Sbjct 1869 CTTATGCAGTGCACGTTAATG--CCAATACCACCAGCAGATTTGGAAATCATGGCGCATT 1812
Query 80255 GTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGC 80314
||| | | | | || || || || |||| | | |||| | | || || ||
Sbjct 1811 GTTCCACTGACTTGAAAATACCTTCAATAGAATCAGCCACCATGGTCAAAAGGAAGCACG 1752
Query 80315 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 80374
|||| ||| | || || | ||| ||| || || || || || || |||||
Sbjct 1751 ATGACAATTGTGGTCGCGGGGTAGCAGCAGCAAACAAAGTGGGCGAGGCATGTGTAAAAT 1692
Query 80375 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTC 80434
| ||||||| | || || || || || || || ||||| || | ||| || |
Sbjct 1691 AACGCTCAGACAACAAGTTATAAGTTTCGATGGCCGAATCTATGTCATCTCCATGTATAC 1632
Query 80435 CTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 80494
||| || || | ||||||||| ||||| ||||||||||| ||||| ||| |||||||
Sbjct 1631 CTATAGCTACTCTCATTAACATATGCTGTGGTCTTTCAACAATCTTACCATTCATTTTCA 1572
Query 80495 ACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 80554
||| || ||| | |||| || || || |||||||| ||||| |||||| || || |
Sbjct 1571 GCAAATAGGATCTCTCCAGTGTCTTGAATCCAAAATAATTGTAGCCAAAGTCACGATCAT 1512
Query 80555 AAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACT-T 80613
||||||| ||| || | || || || | || |||| | ||||||||
Sbjct 1511 AAATAATGGACGAATTCAAACGTTCTGCATTCTTCTGCACCACAT-TGTAGTGATACTCC 1453
Query 80614 GAAATAATCGGAGAA-TGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCAT 80672
||||| || || ||| | || ||| | | | | |||||||| | | | ||| ||
Sbjct 1452 GAAATCATGGGCGAAGTTTTACCCGTCTCTTTG-TTAACATAATGATACAGATCACTTAT 1394
Query 80673 CACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGC 80732
|| || ||||| |||||| ||||||||||| | ||| || ||||| || | || ||
Sbjct 1393 AACCTCTGAAAATACTTTTTTCGTTTCCTTGTGCAAATTGGAGACGGCAATACGAGCCGC 1334
Query 80733 TAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGT 80792
|| ||||||||||| ||| | ||| || | || || ||| | |||||||||| | |
Sbjct 1333 CAATATGGCATAATCACCATGATTTGTTGTCAATGTAGCAGCTGTCTCGGCTGCCAAATT 1274
Query 80793 GTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTT 80852
|||||| ||| ||||| || ||| |||| || | |||||| |||| | ||
Sbjct 1273 GTCCAACTCTTGAGTTGTAACACCACAGTATAAGCCATTGATAACTTTCAGTGTAATGGC 1214
Query 80853 AATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGAT 80912
| || || | | ||| | ||||| ||||| || | ||| ||||||||| || ||
Sbjct 1213 CACTGGGTCAACAAAATCCATATTTAATCCATAGCAAAGCTTTTGAATACGAGATGTAAT 1154
Query 80913 TTTATCAAACATG-ACATTTTCCTTGTATCCATTTCGTTTAATGACAAACATTTT 80966
|||||| || ||| || | || ||| |||| |||||||| ||||||| |||
Sbjct 1153 TTTATCGAA-ATGTACTTCCTCTTTGCGGCCATCTCGTTTAAGAACAAACAATTT 1100
>seq91934
Length=4437
Score = 309 bits (342), Expect = 4e-79
Identities = 512/730 (70%), Gaps = 23/730 (3%)
Strand=Plus/Minus
Query 49775 CCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834
|||||||| | ||| | ||| || |||||||| |||||| ||||| || |||||
Sbjct 3584 CCAATTCAACTAACAAACGATCAGCTACAAATTCAATATATTCCGACATCAATTTACAAT 3525
Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894
|||| || || | || || || | ||| | || | || ||||||||||| ||| |
Sbjct 3524 TCATGCCAATCAAATTGACGGGCAAAGCTTCGGTTAAGAACTCTTGTTCAATTTTTACAG 3465
Query 49895 CATCTGTTATAATAGATCTAACGGTT--TCT-TCAC---TCGGTGGATGCAATAAATGTT 49948
| || ||||| || ||||| ||| |||| | || | || | ||||||||
Sbjct 3464 CTTCCGTTATTATTT------CGGTTATTCTCTCACGGCTGGGACGTTGTATTAAATGTT 3411
Query 49949 TAAACATCAA-ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007
||||||| || ||| || ||||| || || | ||||||||| | | ||| | || |||
Sbjct 3410 TAAACATTAACACA-GCAAAATCACAATGTAAACCCTCGTCACGAGAAATCAACTCATTG 3352
Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067
|| || || || || ||||| || ||||| || || ||||||||||| || |||||
Sbjct 3351 GAGAATGTAAGGCCAGGCATAAGACCACGTTTCTTTAGCCAAAATATCGAAGCAAAACTG 3292
Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC- 50126
||| ||||| || || || || |||||||| |||| || | || ||| || ||||
Sbjct 3291 CCACTGAAGAAAATGCCCTCCACAGCGGCAAATGCAATAATGCGTTCACCAAAATTGGCC 3232
Query 50127 GCTGTCATGT--ATCCA---CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 50181
| | | | ||||| | || |||||||||||||| || ||| ||||||
Sbjct 3231 GATTTTGAGCCAATCCAAGACATT---GCCCAATCGGCCTTGCGCTTAACAGCTGGCATC 3175
Query 50182 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 50241
||||| ||||||||||||||||| | || | | |||||||| || | ||||||
Sbjct 3174 GTTTCAATGGCATTAAAGAGATAATCGCGTTGTTCGCGATCTTTAATGTAGCTGTCGATC 3115
Query 50242 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 50301
|||| |||||||||||| || || | ||||| ||||| || || || || ||||||||
Sbjct 3114 AAAATACTATACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAACCATAGAAACAG 3055
Query 50302 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATT 50361
| ||||| |||| || || ||| |||| |||||| | | ||||||||| || ||
Sbjct 3054 CGTGCCTCTGTAACTTGTACCTCTTGGGAAAAACGTTCAACAAGATTTTCATTGACAATA 2995
Query 50362 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTT 50421
|| || || ||||| || |||| |||||| ||||| | || ||| ||
Sbjct 2994 CCATCGGAAGCAGCAAAGAAGGCCAGAACATGTGAGATAAAGTAACGCTCATTGTCGGTG 2935
Query 50422 AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 50481
||||| | ||| || |||||||||| | |||||||||||| || |||||||| |||
Sbjct 2934 AGTTTTTCCCAGTCCGAATTATCTTTAGAGAGATCTACTTCTTCTACAGTCCAAAAAGAT 2875
Query 50482 GCCTCTGCCT 50491
|| || ||||
Sbjct 2874 GCTTCAGCCT 2865
>seq39385
Length=6125
Score = 89.7 bits (98), Expect = 7e-13
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 44990 AATACCCAATTCCTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATA 45049
||| |||| || ||||| || |||| |||||||| ||||| || || || || | |||
Sbjct 2557 AATGCCCAGCTCTTTGACTTGGGTTAAAGATCTCCAGTCCATATTTGCACTGCCCAGATA 2616
Query 45050 AATATGTGTATTATCGGATATCCAAAATTTTGTATGAAGAACTCCTCCT 45098
||| ||| |||| || || |||||||||||||| || | ||| ||||||
Sbjct 2617 AATGTGTTTATTGTCCGAAATCCAAAATTTTGTGTGTAAAACACCTCCT 2665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716495484116400
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