Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq41982 553 2e-152 seq91934 300 2e-76 seq39385 89.7 7e-13 >seq41982 Length=5201 Score = 553 bits (612), Expect = 2e-152 Identities = 1493/2274 (66%), Gaps = 22/2274 (1%) Strand=Plus/Minus Query 70790 CCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849 |||| |||| ||||| || || | | | ||| | ||| || | | ||| ||||||| Sbjct 3365 CCTTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGC 3306 Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAG 70909 | || |||| || |||| | || ||||| || || | ||| ||| | | Sbjct 3305 CGGTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGG 3246 Query 70910 GATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 70969 | || || | || ||||| | ||||||||||||||||||||| || || | || || | Sbjct 3245 GTTCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTG 3186 Query 70970 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATA 71028 |||||| || | ||||| | ||| ||||||| || ||||| | || | |||| Sbjct 3185 CCATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCAC-GAATA 3127 Query 71029 TCTTCTGGAAGGT-TTGTAT--TCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 |||| |||| | | ||| || || || || | || | |||||| || ||||| Sbjct 3126 TCTTTGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTC 3067 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || || |||| ||||| | | || |||||| || | || | |||| |||| || | Sbjct 3066 ATTTCGTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATA 3007 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 | |||||||| || | || | | || |||||||| |||||| || || | ||| Sbjct 3006 TTGAATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGAT 2947 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 |||||||| ||||| ||||| || || || ||||| |||||||| |||| | | | | Sbjct 2946 TCATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAA 2887 Query 71266 TTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGAT 71325 |||| | |||||| | |||||| ||||| | | ||| ||||| | ||| | Sbjct 2886 TTTCGTACACCATGCTGTTTGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTA 2827 Query 71326 GGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATAT 71385 || ||||| ||||| | | || | ||| Sbjct 2826 GGAGTTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGATAA 2767 Query 71386 GTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAA 71445 || || || || ||| ||||||| | ||||||||| || || ||||| ||||||||| Sbjct 2766 GTTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATAATAA 2707 Query 71446 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT 71505 || ||||||||||| | | ||| | || | ||| || | || || Sbjct 2706 ATAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAAACGC 2647 Query 71506 AAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTA 71565 | | ||| || | ||| || | || || || || || || ||||| | || | | Sbjct 2646 ATTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGA 2587 Query 71566 TTAGAAATTTC--AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623 |||| ||||| || || || | ||||||| | ||||| ||||| ||||| ||||||| Sbjct 2586 TTAG--ATTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGAT 2529 Query 71624 TTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA---TCTCCCATCTA 71680 || || || ||||| |||| |||| ||| ||| || || | | || Sbjct 2528 TTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGTTTTTTCAGGCG 2469 Query 71681 TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGG 71740 | ||||||| || | ||| | || |||| |||||| ||||||| ||||| | ||| Sbjct 2468 TCACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCATCGGGTGCGG 2409 Query 71741 CATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 71800 ||| | || |||||| || || | ||||| ||||| || || || | |||||| || | Sbjct 2408 AATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCAATATTTTGCTGGT 2349 Query 71801 TACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAG 71860 ||||||| ||||| |||||||| || | || | |||||||| ||||| | |||| Sbjct 2348 TACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTTCTACTTGAG 2289 Query 71861 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTC 71920 ||| || || || ||| | | | ||||| | || || | | ||| Sbjct 2288 CTTCAATTATGGCAAACCAAAGAGCCTGGGCCTTGACGGTACGGTTTGCTTTGCCTTCAT 2229 Query 71921 TTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGAC 71980 |||| || | ||||| ||| |||||| || | |||||| | | | | ||||||| Sbjct 2228 TTTCATACTTGGTATACAATTCTTCGAATTCCGCACCCCAAACTTCCTGCAGACCAGGAC 2169 Query 71981 ATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGAT 72040 ||| | |||||||| || ||||| ||||||| || | ||||| ||||||||| | || Sbjct 2168 ATTTGTGGGGACACATTAACGACCAATCTCCATTTTCTTCTACTCTTTTCATAAACAAAT 2109 Query 72041 CAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTC 72099 | || ||||| || || ||| ||||||||||| | ||| ||||| || || || ||||| Sbjct 2108 CGGGTATCCACAGGGC-ATAGAATAGATCTCTAGCTCTGTGCTCTTCCTTGCCGGTATTT 2050 Query 72100 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 72159 || || | ||| | || | | |||||| |||||||| || ||||| || ||||| | Sbjct 2049 TTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATGGCAAAT 1990 Query 72160 ACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 72219 |||| || |||||| || || ||||||| || | || || ||| | || || Sbjct 1989 GCTCCTGGACGTTTGCCGCCGCCTTGATCTACATAGCGGGCAACATTGTTAAACACCCTA 1930 Query 72220 AACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCA 72279 | ||| || | | ||||| || | || || || || ||| | | || |||| Sbjct 1929 AGCATGGGCACCAGTCCATTTGAGGTGCCGTTAGTACCATCGATGGAAGTGCCCTTGGCC 1870 Query 72280 CGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 72337 | || | ||| || || || || || || || ||| || || | |||||| Sbjct 1869 CTTATGCAGTGCACGTTAAT--GCCAATACCACCAGCAGATTTGGAAATCATGGCGCATT 1812 Query 72338 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 72397 ||| | | | | || || || ||| |||| ||| |||| | | || || || Sbjct 1811 GTTCCACTGACTTGAAAATACCTTCAATAGAATCAGCCACCATGGTCAAAAGGAAGCACG 1752 Query 72398 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 72457 |||| ||| | || || | ||| ||| || || || || || || ||||| Sbjct 1751 ATGACAATTGTGGTCGCGGGGTAGCAGCAGCAAACAAAGTGGGCGAGGCATGTGTAAAAT 1692 Query 72458 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTC 72517 | ||||||| | || || || || || || || ||||| || | |||||| | Sbjct 1691 AACGCTCAGACAACAAGTTATAAGTTTCGATGGCCGAATCTATGTCATCTCCATGTATAC 1632 Query 72518 CTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 72577 ||| || || | ||||||||||||||| ||||||||||| ||||| ||| ||||||| Sbjct 1631 CTATAGCTACTCTCATTAACATATGCTGTGGTCTTTCAACAATCTTACCATTCATTTTCA 1572 Query 72578 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 72637 ||| |||||| | |||| || || || |||||||| ||||| |||||| || || | Sbjct 1571 GCAAATAGGATCTCTCCAGTGTCTTGAATCCAAAATAATTGTAGCCAAAGTCACGATCAT 1512 Query 72638 AAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT-T 72696 ||||||| |||||| | || || || | || | || | |||||||| Sbjct 1511 AAATAATGGACGAATTCAAACGTTCTGCATTCTTCTGCACCACAT-TGTAGTGATACTCC 1453 Query 72697 GAAATAATCGGAGAA-TGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCAT 72755 ||||| || || ||| | || ||| | | | | |||||||| | | | ||| || Sbjct 1452 GAAATCATGGGCGAAGTTTTACCCGTCTCTTTG-TTAACATAATGATACAGATCACTTAT 1394 Query 72756 CACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGC 72815 || || ||||| |||||| ||||||||||| | ||| || ||||| || | || || Sbjct 1393 AACCTCTGAAAATACTTTTTTCGTTTCCTTGTGCAAATTGGAGACGGCAATACGAGCCGC 1334 Query 72816 TAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGT 72875 | ||||||||||| ||| | ||| || | || || ||| | || ||||||| | | Sbjct 1333 CAATATGGCATAATCACCATGATTTGTTGTCAATGTAGCAGCTGTCTCGGCTGCCAAATT 1274 Query 72876 GTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTT 72935 |||||| ||| ||||| || ||| |||| || | |||||| |||| | || Sbjct 1273 GTCCAACTCTTGAGTTGTAACACCACAGTATAAGCCATTGATAACTTTCAGTGTAATGGC 1214 Query 72936 AATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGAT 72995 | || || | | ||| | ||||| ||||| || | ||| ||||||||| || || Sbjct 1213 CACTGGGTCAACAAAATCCATATTTAATCCATAGCAAAGCTTTTGAATACGAGATGTAAT 1154 Query 72996 TTTATCAAACATAACATTTTCCCGGCATCCATTTCGTTTAACGACAAACATTTT 73049 |||||| || || | || || |||| |||||||| ||||||| ||| Sbjct 1153 TTTATCGAAATGTACTTCCTCTTTGCGGCCATCTCGTTTAAGAACAAACAATTT 1100 >seq91934 Length=4437 Score = 300 bits (332), Expect = 2e-76 Identities = 507/726 (70%), Gaps = 15/726 (2%) Strand=Plus/Minus Query 41880 CCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 |||||||| | ||| | ||| || | ||||| |||||| ||||| || ||||| Sbjct 3584 CCAATTCAACTAACAAACGATCAGCTACAAATTCAATATATTCCGACATCAATTTACAAT 3525 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || || | || || || | ||| | || | || ||||||||||| || | Sbjct 3524 TCATGCCAATCAAATTGACGGGCAAAGCTTCGGTTAAGAACTCTTGTTCAATTTTTACAG 3465 Query 42000 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 42059 | || ||||| || ||| | | || || || | | | |||||||||||||| Sbjct 3464 CTTCCGTTATTATTTCGGTTATTCTCTCACGGCTGGGACGTTGTATTAAATGTTTAAACA 3405 Query 42060 TCAA-ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAAC 42118 | || ||| || ||||| || || | |||||| || | | ||| || || ||||| || Sbjct 3404 TTAACACA-GCAAAATCACAATGTAAACCCTCGTCACGAGAAATCAACTCATTGGAGAAT 3346 Query 42119 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAA 42178 || || || ||||| || ||||| || || ||||||||||| || ||||| ||| Sbjct 3345 GTAAGGCCAGGCATAAGACCACGTTTCTTTAGCCAAAATATCGAAGCAAAACTGCCACTG 3286 Query 42179 AAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTGT 42236 ||||| || || || || || ||||| ||||||| | || ||| || ||| | | | Sbjct 3285 AAGAAAATGCCCTCCACAGCGGCAAATGCAATAATGCGTTCACCAAAATTGGCCGATTTT 3226 Query 42237 CATGTA-TCCA---CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292 | | |||| | || |||||||||||||| || ||| ||||||||||| Sbjct 3225 GAGCCAATCCAAGACATT---GCCCAATCGGCCTTGCGCTTAACAGCTGGCATCGTTTCA 3169 Query 42293 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGA 42352 ||||||||||||||||| | || | | |||||||| || | |||||||||| | Sbjct 3168 ATGGCATTAAAGAGATAATCGCGTTGTTCGCGATCTTTAATGTAGCTGTCGATCAAAATA 3109 Query 42353 CTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCC 42412 ||||||||||| || || | ||||| ||||| || || || || |||||||| | ||| Sbjct 3108 CTATACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAACCATAGAAACAGCGTGCC 3049 Query 42413 TCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCA 42472 || ||||| ||||| ||| |||| |||||| | | |||||| || || || || || Sbjct 3048 TCTGTAACTTGTACCTCTTGGGAAAAACGTTCAACAAGATTTTCATTGACAATACCATCG 2989 Query 42473 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTAATT 42530 || ||||| || |||| |||||| ||||| || || | ||||| | || Sbjct 2988 GAAGCAGCAAAGAAGGCCAGAACATGTGAGATAAAGTAACGCTCATTGTCGGTG--AGTT 2931 Query 42531 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTT 42590 | | ||| || |||||||||| | ||||||||||||||| |||||||| ||||||| Sbjct 2930 TTTCCCAGTCCGAATTATCTTTAGAGAGATCTACTTCTTCTACAGTCCAAAAAGATGCTT 2871 Query 42591 CTGCCT 42596 | |||| Sbjct 2870 CAGCCT 2865 >seq39385 Length=6125 Score = 89.7 bits (98), Expect = 7e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 36473 AATACCCAATTCCTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATA 36532 ||| |||| || ||||| || |||| |||||||| ||||| || || || || | ||| Sbjct 2557 AATGCCCAGCTCTTTGACTTGGGTTAAAGATCTCCAGTCCATATTTGCACTGCCCAGATA 2616 Query 36533 AATATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCCT 36581 ||| ||| |||| || || |||||||||||||| || | ||| |||||| Sbjct 2617 AATGTGTTTATTGTCCGAAATCCAAAATTTTGTGTGTAAAACACCTCCT 2665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669482241207600