Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq64788 104 2e-17 >seq64788 Length=4825 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || || ||||| | ||| |||| ||||| ||||| || ||||| ||||||||||| | | Sbjct 1817 CCACCACGCAAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTGTAATCAGAC 1876 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| |||| |||| |||||||| || |||| | | || ||||| || Sbjct 1877 AATGTGCGCCCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGGG 1936 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || ||||| |||||| ||| || | | | ||||||| |||||| Sbjct 1937 ATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACC 1996 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||| |||||||| || || || || |||||||| |||||||| Sbjct 1997 TCCAAGGTGATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 2043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413574859788940