Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq194683 105 6e-18 >seq194683 Length=1703 Score = 105 bits (116), Expect = 6e-18 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 5315 ATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTT 5374 |||||||||||||| ||||| || || | || || || || ||||| || ||||| Sbjct 1026 ATGCGTTCGCATATGAGCTGTGCAATGCGATCACCACGTTTGACATCAAAATC--TGTTT 1083 Query 5375 CCGAAG--TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAG 5432 | ||| || || || || || || | |||||| ||||| |||||||| ||||| |||| Sbjct 1084 CGGAATGATTGAATAGTACAACGCCTAGATTGCCACGGTAATCTTCGTCAATAACTCCAG 1143 Query 5433 CGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGC 5492 ||||||| || ||||||| || || || || || || || || |||| | ||||| Sbjct 1144 CGCCCACATCAATAAAGTTCTTAACAGCCAGACCAGAGCGAGGCGCTACTCTACCGTACG 1203 Query 5493 AACC 5496 |||| Sbjct 1204 AACC 1207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446644960231200