Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq194683 105 6e-18
>seq194683
Length=1703
Score = 105 bits (116), Expect = 6e-18
Identities = 135/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 5315 ATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTT 5374
|||||||||||||| ||||| || || | || || || || ||||| || |||||
Sbjct 1026 ATGCGTTCGCATATGAGCTGTGCAATGCGATCACCACGTTTGACATCAAAATC--TGTTT 1083
Query 5375 CCGAAG--TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAG 5432
| ||| || || || || || || | |||||| ||||| |||||||| ||||| ||||
Sbjct 1084 CGGAATGATTGAATAGTACAACGCCTAGATTGCCACGGTAATCTTCGTCAATAACTCCAG 1143
Query 5433 CGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGC 5492
||||||| || ||||||| || || || || || || || || |||| | |||||
Sbjct 1144 CGCCCACATCAATAAAGTTCTTAACAGCCAGACCAGAGCGAGGCGCTACTCTACCGTACG 1203
Query 5493 AACC 5496
||||
Sbjct 1204 AACC 1207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 446644960231200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |