Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq123679 116 2e-21 >seq123679 Length=5127 Score = 116 bits (128), Expect = 2e-21 Identities = 189/272 (69%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 3873 AAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGC 3932 |||| || |||||| | ||||| |||||||| || |||||||| |||||||||||||| | Sbjct 3518 AAGGCGTCCATTTTGTTATGGCAGACGGTGGATTTTCGGTTGAAGGTCAAGAAAATATTC 3459 Query 3933 AAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATAC 3992 |||| || |||||||| | ||||||||||||| ||| | | || | | || || Sbjct 3458 AAGAGATTTTATCGAAGCAACTGTATTTGTGTCAGTGTCTCACAGCTCTCAAAATTCTAA 3399 Query 3993 GAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTT 4052 | ||| || | || || | || ||||||||||| | || |||| |||| Sbjct 3398 GGTGCAATGGAAGTTTTATTTGTAAGCTATTTGATATATTTACTGCGTTCAGTGTTGGTC 3339 Query 4053 TAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGC 4112 | || ||| | |||||| | ||| | || | || | |||||| || | Sbjct 3338 TGGTATATCTAATGTATCAGTGTTTCGAAGAAATATCAATAATAAAACCAAATAGTAGTC 3279 Query 4113 GACCGGCCAATTCTGAAAGATATTTGGTGTGT 4144 |||| || ||||| ||||||||||| |||||| Sbjct 3278 GACCTGCAAATTCGGAAAGATATTTAGTGTGT 3247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275887893137530