Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq112160 122 5e-23
seq20405 118 6e-22
seq116351 116 2e-21
seq164462 113 2e-20
seq136281 113 2e-20
seq118909 113 2e-20
seq28476 111 8e-20
seq65472 104 1e-17
seq162701 89.7 3e-13
seq151231 87.8 9e-13
>seq112160
Length=1628
Score = 122 bits (134), Expect = 5e-23
Identities = 83/93 (89%), Gaps = 1/93 (1%)
Strand=Plus/Minus
Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496
|||||| |||| ||||| ||||||||| |||||||||| |||||||||||||||||
Sbjct 1431 AATTAAACAAAATACAAAT-GGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 1373
Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||| ||||||||||||||||||||
Sbjct 1372 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 1340
>seq20405
Length=2411
Score = 118 bits (130), Expect = 6e-22
Identities = 81/92 (88%), Gaps = 4/92 (4%)
Strand=Plus/Minus
Query 11438 ATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497
|||| |||||||| |||||||||| |||||||||| ||||||||||||||||||
Sbjct 2197 ATTATCAAAAAATC----TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAG 2142
Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||| ||||||||||||||||||||
Sbjct 2141 CACGACGCTCTAACCAACTGAGCTAATGGGCC 2110
>seq116351
Length=1614
Score = 116 bits (128), Expect = 2e-21
Identities = 71/76 (93%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 866 ATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 925
Query 11514 ACTGAGCTAATGGGCC 11529
||||||||||||||||
Sbjct 926 ACTGAGCTAATGGGCC 941
>seq164462
Length=2385
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 993 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 934
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 933 TGAGCTAATGGGCC 920
>seq136281
Length=4605
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1720 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1779
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 1780 TGAGCTAATGGGCC 1793
>seq118909
Length=2297
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1347 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1406
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 1407 TGAGCTAATGGGCC 1420
>seq28476
Length=8292
Score = 111 bits (122), Expect = 8e-20
Identities = 94/112 (84%), Gaps = 7/112 (6%)
Strand=Plus/Minus
Query 11426 GGGAAATA-TAGA-ATTAATAAAAAATCA--AAT---TGGCCCATGAAAGGATCGAACCT 11478
|||||||| ||| ||| | ||||||| | ||| ||||||||| ||||||||||
Sbjct 1393 GGGAAATAATAGTCATTTAAAAAAAATAATCAATGTATGGCCCATGGGGGGATCGAACCC 1334
Query 11479 TCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1333 GCGGCCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 1282
Score = 109 bits (120), Expect = 3e-19
Identities = 93/111 (84%), Gaps = 7/111 (6%)
Strand=Plus/Minus
Query 11426 GGGAAATA-TAGA-ATTAATAAAAAATCA--AAT---TGGCCCATGAAAGGATCGAACCT 11478
|||||||| ||| ||| | ||||||| | ||| ||||||||| ||||||||||
Sbjct 1177 GGGAAATAATAGTCATTTAAAAAAAATAATCAATGTATGGCCCATGGGGGGATCGAACCC 1118
Query 11479 TCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1117 GCGGCCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 1067
>seq65472
Length=1975
Score = 104 bits (114), Expect = 1e-17
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| |||||||||| || |||||||||||||||||||||||||| ||||||
Sbjct 653 TGGCCCATGGGGGGATCGAACCCGCGGCCTTCGCGTTATTAGCACGACGCTCTAACCAAC 594
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 593 TGAGCTAATGGGCC 580
>seq162701
Length=2087
Score = 89.7 bits (98), Expect = 3e-13
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 11472 CGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||| || |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 209 CGAACCCGCGGCCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 152
>seq151231
Length=1449
Score = 87.8 bits (96), Expect = 9e-13
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 11481 GACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 628 GACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 677
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 260861750640760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |