Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq41982 138 1e-27
seq64788 100 3e-16
seq125840 95.1 1e-14
>seq41982
Length=5201
Score = 138 bits (152), Expect = 1e-27
Identities = 917/1440 (64%), Gaps = 63/1440 (4%)
Strand=Plus/Minus
Query 147113 CACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTT 147172
||| || ||||| || | |||||||| ||||| || |||||||| |||||||| || ||
Sbjct 3358 CACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCCGGTCTT 3299
Query 147173 TAAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTATAG--GTTGGATTG 147230
||| || || ||| | |||| ||||| || | || |||| | ||||| ||
Sbjct 3298 TAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAA---TTTACCGTAGTTGGGTTC 3242
Query 147231 -GCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCAT 147289
|||||| | ||||| ||| || || ||||||||| ||| || || || || |||||
Sbjct 3241 AGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGCCAT 3182
Query 147290 GTCCAACACTACTTTTTGTTTAATT-TCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGT 147348
| || | | | || || | |||||| | ||||| | || | |||| |
Sbjct 3181 TTG-AATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATCTT 3123
Query 147349 GTGGAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATT---TTTATCATGA 147405
||||||||||| || ||||| ||| ||| || ||||||| ||| ||||
Sbjct 3122 TGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTCATTT 3063
Query 147406 TATCTGTCGA-ATAT-ACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCAC 147463
|| | | | || ||||| || | |||| | | ||| |||||||| |
Sbjct 3062 CGTCATCCCATAGATCACGTTCA-GTTAAATCTTTTAGCAA----ATGATGATTGACAAT 3008
Query 147464 -TTGATACTCGCCCGACAGAACTCTTC--GTACGTACAAATTACTAGTAAACGGCTCGAA 147520
|||| | || ||||| || || | || ||| || | ||| ||| | ||||| ||
Sbjct 3007 ATTGA-ATTCTCCCGATAGCACACGTCTGGTA--TAAATATTGGAGGTATAAGGCTCAAA 2951
Query 147521 CGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAA 147580
|| || || || || | || ||||| || | || || ||||| || | | ||
Sbjct 2950 TGATTCATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAA 2891
Query 147581 TGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTA-AGCTCGTCCCAGTTCCAAAGAT 147639
||||| |||| || ||| |||| || ||| | ||| ||||||||| | ||
Sbjct 2890 AGAATTTCGTACACCATGCTGTTTGATTT-TCTCTTTCAACTCTGTCCAGTTCCACAAAT 2832
Query 147640 CATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTC 147699
| | | ||| ||||||||| ||| | |||| | || |||| | |||| |
Sbjct 2831 CGGTAGGA--GTTT-TATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGC 2775
Query 147700 CATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTT--AGTGC 147757
| |||| || || | || || || | | ||| ||| ||| | |||
Sbjct 2774 CGGGATAAGTTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAG--CTTCCAATGC 2717
Query 147758 ACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCTTGGCTGTCGTA 147817
||||||||||||||||| |||| | || |||||| |||| || ||| |||||
Sbjct 2716 GCCATAATAAATAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTA 2657
Query 147818 GGGCATATCCA---AAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGG 147874
||| | | || |||| || || || ||||| || || | ||| || || || ||
Sbjct 2656 GGGGAAACGCATTAAAATC---AATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGG 2600
Query 147875 TCGGTGTCTGAAATTCGATG-CTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAA 147933
|| || | | ||| ||| | || | | || | |||||||| || | ||| || |
Sbjct 2599 ACGATGACGTAGATTAGATTTCCTGGCCTCCGGCAGA-GGATAAAAGTTAATGTCTATGA 2541
Query 147934 TTTTATTGAGATTATTGGTAACCACTCTAGATACATTGTAGAGCGACTTAAAGTCGAA-G 147992
|||| |||||||| ||||||| ||| ||| ||||| | | |||||||||||| |
Sbjct 2540 TTTTGTTGAGATTTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATG 2481
Query 147993 CTTTTAAACTGTTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACACACGGCC 148052
|||| | | | |||| |||| | ||| || |||||||| |||||||||||
Sbjct 2480 TTTTTTCAGGCGTCA----CAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCT 2425
Query 148053 GTTTC-TCGATTGTCGCTATATTGAACGATTTCGGCACACAGATTGCTGTTTCGAATCAC 148111
| || ||| || || ||| | || ||||| | ||||| || ||| |||
Sbjct 2424 ATCTCATCGGGTG-CGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGT 2366
Query 148112 TCCCTCGtttttttGATTATTTTTATTGTTAACGTGATCTTTAAACATCATGTATGGAGC 148171
|| |||| || ||| | ||| ||| | ||| || ||| |||||| ||||
Sbjct 2365 GCCAATATTTTGCTGGTTACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGT 2306
Query 148172 TCCGGTCTCGACTTGAGTCTCAATAATTTTTCTATGAAGATCTAAAGCC--GAAATT--T 148227
|| || || ||||||| ||||| || |||| | ||| || |
Sbjct 2305 ACCTGTTTCTACTTGAGCTTCAATTATGGCAAACCAAAGAGCCTGGGCCTTGACGGTACG 2246
Query 148228 GTTTTTTAAACTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCAT 148287
|||| | |||||||| || || || || | || |||||||| ||
Sbjct 2245 GTTTGCT----TTGCCTTCATTTTCATACTTGGTATACAATTCTTCGAATTCCGCACCCC 2190
Query 148288 AGCAATCGTTTAAACCGGGACACTCGTCGGGGCACATCAATGACC-ATTTCCCTCCTGTC 148346
| || | | ||| ||||| | || ||| ||||| || |||| || ||| | | ||
Sbjct 2189 AAACTTCCTGCAGACCAGGACATTTGTGGGGACACATTAACGACCAATCTCCAT--TTTC 2132
Query 148347 TT-TACCCTCTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTT 148405
|| ||| || |||||||||| ||| ||| |||||| |||| | | ||||| | ||| |
Sbjct 2131 TTCTACTCTTTTCATAAACAAATCGGGTATCCACAGGGCATAGAATAGATCTCTAGCTCT 2072
Query 148406 CATATCCTCGGCACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCA 148465
|| || || |||| ||||| ||||||||| ||||| |||| |||||
Sbjct 2071 GTGCTCTTCCTTGCCGGTATTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCA 2012
Query 148466 AGGCTCGATGTATACGGTCATGGCGCCTTTCCTTTT---ACCTCCTTGATCGACATGGCG 148522
|||||| | || | || | || ||| | ||| || |||||||| |||| |||
Sbjct 2011 AGGCTCCAAATAAATGGCAAATGCTCCTGGACGTTTGCCGCCGCCTTGATCTACATAGCG 1952
>seq64788
Length=4825
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
||||||||| | || || || ||||||||||| || | |||||| | || | ||| ||
Sbjct 2274 AAAATGCAAATCTTCGTGAAGACATTAACTGGCAAGACCATCACCTTAGAGGTCGAACCA 2215
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|| || || || | ||||| || ||| || || || || || || || |||
Sbjct 2214 TCTGATACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCCCCAGAT 2155
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|||||| | || |||| | ||| |||||||| ||||| | | | | ||| ||
Sbjct 2154 CAACAACGTCTAATTTTTGCCGGTAAACAACTTGAAGACGGACGCACTTTGTCCGATTAC 2095
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||||||||||||||||||| | ||| |||| ||
Sbjct 2094 AACATTCAAAAAGAATCTACTCTTCATTTGGTTCT 2060
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| || ||||| ||||| ||| | |||||| | || | || | |
Sbjct 2043 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCTTCC 1984
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || || || | || ||| || ||| ||||| ||||| || ||||| ||||||
Sbjct 1983 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 1924
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | | |||| || ||| |||||| | ||||| | | | | || || ||
Sbjct 1923 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 1864
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977
|| |||||||||||||| | ||| ||||
Sbjct 1863 ATACAAAAAGAATCTACATTGCATTTGGT 1835
>seq125840
Length=3442
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| |||||||| || | || ||| | ||| | || | ||
Sbjct 538 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGCCTTAC 597
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | ||||| || || ||||||||||| || || || ||||||
Sbjct 598 GACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 657
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | | || | || ||| |||||| | ||||||| | | | | | |||||| ||
Sbjct 658 CAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAAT 717
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| ||||| ||||| || | ||| |||| ||
Sbjct 718 ATCCAAAAGGAATCCACCTTACATTTGGTACT 749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477480642367200
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