Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq41982 170 2e-37
seq125840 98.7 9e-16
seq64788 98.7 9e-16
>seq41982
Length=5201
Score = 170 bits (188), Expect = 2e-37
Identities = 903/1410 (64%), Gaps = 64/1410 (5%)
Strand=Plus/Minus
Query 131863 CACGGTGAATTGAATTGTATTCGCAGCAGGCTTAGTTCTTAAATAATACATGCCCGTCTT 131922
||| || ||||| || | ||| || || || || || || |||||||||||||| |||||
Sbjct 3358 CACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCCGGTCTT 3299
Query 131923 CAAGCCTTTCTCCCAAGAATAATTGTGTATGGACGATAAAATTTTGTAGCTGGGATTGGC 131982
|||||| | ||| | ||| || || || | || | |||| |||| | ||
Sbjct 3298 TAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGGTTCAGC 3239
Query 131983 CACAAACAGATTGAGCGATTGACTCTGATCGATGTAAGGTCCCCTGTCTGCGGCCATATT 132042
|||| | ||||| ||| ||||| ||||||||| ||| || | || || ||||| ||
Sbjct 3238 CACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGCCAT-TT 3180
Query 132043 CAACAATACTTTCTGCTTAATT-TCCCAAGCGGTCTTGAAGAGCGCCTTGACGTCGTGTG 132101
|| | | | | | || | |||||| | ||||| | || | | || | |
Sbjct 3179 GAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATCTTTGG 3120
Query 132102 GAATGTCATCGATATTCTGTACAGATCCGTTGTTTTTGATAATTTTCATCATCAGTTCTG 132161
|||| ||||| || |||| ||| ||| || |||||| | | ||| ||| |
Sbjct 3119 GAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTCATTTC-G 3061
Query 132162 TCG------AGTACACGTTGCAGTCTACGAGTTTATCGACGAGATGTTGATTTACTAT-T 132214
|| || |||||| |||| | |||| | | ||| ||||| || || |
Sbjct 3060 TCATCCCATAGATCACGTT-CAGTTAAATCTTTTAGCAA----ATGATGATTGACAATAT 3006
Query 132215 TGATATTCACCCGATAAGACTCTTC--GTACGTACAAATTACTAGTAAACGGCTCGAACG 132272
||| |||| ||||||| || | || ||| || | ||| ||| | ||||| || |
Sbjct 3005 TGA-ATTCTCCCGATAGCACACGTCTGGTA--TAAATATTGGAGGTATAAGGCTCAAATG 2949
Query 132273 ATTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATGTAGGCAATCAATAATG 132332
|||| || || ||||| ||||| || || | || || ||||| ||| | | || |
Sbjct 2948 ATTCATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAG 2889
Query 132333 AATTGCGCAGCCCGTG---TATGGCCATTTGCCGTTTAAGCTCGTCCCAGTTCCACAGAT 132389
|||| || | || || | || |||| | ||| | ||| ||||||||||| ||
Sbjct 2888 AATTTCGTACACCATGCTGTTTG---ATTTTCTCTTTCAACTCTGTCCAGTTCCACAAAT 2832
Query 132390 CATTCGATTGAGAGATATTCCACAAATCAAACTGTAA-ATGACCGCTACTTGCAGGAGAT 132448
| | | ||| ||||||||| ||| | |||| ||| || ||||| | || |
Sbjct 2831 CGGTAG---GAGTTTTATTCCACATATCGTATTGTAGTATGCCCT-TACTTACCGGGCAG 2776
Query 132449 CCGTTATAAGAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTCTGACTCAGGGCA 132508
||| ||||| || || | || | || || | ||| || || ||
Sbjct 2775 CCGGGATAAGTTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCG 2716
Query 132509 CCATAATAAATAGTCTCTGAGATTTTTCTATT---CAATTCCCTTGCTTGTTGACTGTCG 132565
|||||||||||||| || | |||| | ||| ||| || || | || || |||
Sbjct 2715 CCATAATAAATAGTTTCGAAAATTTGTTGATTTAACAAAGCC---GCCTTTTCGCTTTCG 2659
Query 132566 TAGGGCAAAT---TTAAAATAGCGAACGCATCGGCAAGTCCCTGAATGCCGATACCGATG 132622
||||| ||| ||||||| || | |||||||| ||||| | || || || ||
Sbjct 2658 TAGGGGAAACGCATTAAAATC---AATGTGTCGGCAAGACCCTGCACACCTATGCCAATA 2602
Query 132623 GGTCTATGTTTAAAATTCGATACTTGTGCGCTA-GTCAGCGGATAAAAGTTTTTGTCTAT 132681
|| | ||| | ||| ||| | || || | ||| ||||||||||| |||||||
Sbjct 2601 GGACGATGACGTAGATTAGATT-TCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTAT 2543
Query 132682 TATTTTATTGAGATTGTTAGTGACAACTCTAGCCACTTTATATAGCGATTCAAAGTCAAA 132741
||||| |||||||| || || | ||| ||| || || | || | |||||| ||
Sbjct 2542 GATTTTGTTGAGATTTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAA 2483
Query 132742 GTTTTTAGTCCTTTTGTTGGCA-AAACA-ATTGACGGCAATCGAGGCCAAATTGCATACG 132799
|||| || | | || ||||| ||| | ||| || ||||||||||| || |||
Sbjct 2482 TGTTTT-----TTCAGGCGTCACAAACATATTAAGGGCTATTGAGGCCAAATTACACACG 2428
Query 132800 GCTGTCTCTTTATTATCGCTATACTGTACGATTTCTGCACACAAATTACTGTTTCGAATA 132859
||| |||| | || ||||| ||| ||||| | |||||| |||||| |||
Sbjct 2427 GCTATCTCATCGGGTGCGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAAT- 2369
Query 132860 ACTCCCAAGtttttttGATTGTTTTTCT--CGTTTAC-GTTATCTTTATGCAACATGTAC 132916
| | |||| | ||||| | ||| ||| || |||| | ||| || | |||||||||
Sbjct 2368 AGTGCCAA--TATTTTGCTGGTTACTCTTACGATTACAGGCATCCTTGTACAACATGTAG 2311
Query 132917 GGACCTCCGGTTTCGACCTGAATTTCGATAATTTTTCTGTGAAGATCTAACGCCAAAATT 132976
||| || ||||| || ||| ||| || || |||| | ||| |
Sbjct 2310 GGAGTACCTGTTTCTACTTGAGCTTCAATTATGGCAAACCAAAGAGCCTGGGCCTTGA-C 2252
Query 132977 TGTTC-TTTAAACTTGCCCTGAGTCTCGTAACTTTCGTAT--AATCGCTCAAATTCTTCG 133033
|| | || ||||| | | | || || || |||| ||| || ||||| |
Sbjct 2251 GGTACGGTTTGCTTTGCCTTCATTTTCATA--CTTGGTATACAATTCTTCGAATTCCGCA 2194
Query 133034 CCATAGCAGTCGTTCAAACCGGGACACTCGTCAGGACACATCAATGACCATTTTTCTCCT 133093
|| | || | || ||| ||||| | || |||||||| || ||||| | | | |
Sbjct 2193 CCCCAAACTTCCTGCAGACCAGGACATTTGTGGGGACACATTAACGACCAATCTCCATTT 2134
Query 133094 GCGCTCACCCTTTTCATGAACAACGAAGGTGTCCACATGGCAAAAAATAAATCGCGAGCC 133153
| || |||||||| ||||| ||| |||||| |||| | |||| ||| | |||
Sbjct 2133 TCTTCTACTCTTTTCATAAACAAATCGGGTATCCACAGGGCATAGAATAGATCTCTAGCT 2074
Query 133154 TTCATATCTTCCGCGCCCATATTTCGTTTCAAGTCCaaaaaagtaaaaaTGTCTGCATGC 133213
| |||||| ||| ||||| || || |||||||| |||||| |||| ||||
Sbjct 2073 CTGTGCTCTTCCTTGCCGGTATTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGC 2014
Query 133214 CAAGGCTCGATATATACGGCCAAAGCGCCT 133243
|||||||| | ||| | ||| || || |||
Sbjct 2013 CAAGGCTCCAAATAAATGGCAAATGCTCCT 1984
>seq125840
Length=3442
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || ||||| |||||||| || | |||||| | ||||||||| | ||
Sbjct 538 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGCCTTAC 597
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | ||||| || || ||||||||||| || || || ||||||
Sbjct 598 GACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 657
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | |||| | || ||| || ||| | ||||||| | | | | ||| || ||
Sbjct 658 CAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAAT 717
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199
|| ||||| ||||| || | ||||| ||
Sbjct 718 ATCCAAAAGGAATCCACCTTACATTTGGT 746
>seq64788
Length=4825
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/216 (72%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || ||||||||||| |||||| | ||||| | || ||||| ||| |
Sbjct 1815 ATGCAAATATTCGTTAAAACATTAACGGGAAAAACAATTACATTAGAGGTCGAA-CCATC 1757
Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
| | ||||| || | || ||| || || ||||||||||| || || || |||||
Sbjct 1756 GGATACCATAGAAAATGTTAAAGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCA 1697
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGA-AACGTCAGCGATTAT 24167
|||| | | |||| || || || ||| | |||||| ||| | | ||| ||||||
Sbjct 1696 ACAGCGTTTAATTTTCGCTGGTAAACAATTGGAAGATGGACGTACATTGTC--CGATTAC 1639
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203
||||| |||||||| || || |||| || || |||
Sbjct 1638 AACATCCAAAAAGAGTCGACCCTTCACTTGGTCTTA 1603
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || ||||| ||||| ||| | || ||| | || || ||| | |
Sbjct 2043 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCTTCC 1984
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || || || | || ||| || ||| ||||| ||||| || ||||| ||||||
Sbjct 1983 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 1924
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | |||||| || ||| || ||| | ||||| | | | | ||||| ||
Sbjct 1923 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 1864
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||||||||||||| | ||||| || ||| | ||| | || ||
Sbjct 1863 ATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGG 1817
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
||||||||| | || || || ||||||||||| || | || ||| | || ||||| ||
Sbjct 2274 AAAATGCAAATCTTCGTGAAGACATTAACTGGCAAGACCATCACCTTAGAGGTCGA-ACC 2216
Query 24048 AAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
| | || || || || | ||||| || ||| || || || ||||| || || ||
Sbjct 2215 ATCTGATACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCCCCAGA 2156
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|||||| | || |||| | ||| || ||||| ||||| | | | | ||||||
Sbjct 2155 TCAACAACGTCTAATTTTTGCCGGTAAACAACTTGAAGACGGACGCACTTTGTCCGATTA 2096
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGT 24199
|||||||||||||||||||| ||||||| ||
Sbjct 2095 CAACATTCAAAAAGAATCTACTCTTCATTTGGT 2063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428901078214050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |