Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq41982 170 2e-37 seq125840 98.7 9e-16 seq64788 98.7 9e-16 >seq41982 Length=5201 Score = 170 bits (188), Expect = 2e-37 Identities = 903/1410 (64%), Gaps = 64/1410 (5%) Strand=Plus/Minus Query 131863 CACGGTGAATTGAATTGTATTCGCAGCAGGCTTAGTTCTTAAATAATACATGCCCGTCTT 131922 ||| || ||||| || | ||| || || || || || || |||||||||||||| ||||| Sbjct 3358 CACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCCGGTCTT 3299 Query 131923 CAAGCCTTTCTCCCAAGAATAATTGTGTATGGACGATAAAATTTTGTAGCTGGGATTGGC 131982 |||||| | ||| | ||| || || || | || | |||| |||| | || Sbjct 3298 TAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGGTTCAGC 3239 Query 131983 CACAAACAGATTGAGCGATTGACTCTGATCGATGTAAGGTCCCCTGTCTGCGGCCATATT 132042 |||| | ||||| ||| ||||| ||||||||| ||| || | || || ||||| || Sbjct 3238 CACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGCCAT-TT 3180 Query 132043 CAACAATACTTTCTGCTTAATT-TCCCAAGCGGTCTTGAAGAGCGCCTTGACGTCGTGTG 132101 || | | | | | || | |||||| | ||||| | || | | || | | Sbjct 3179 GAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATCTTTGG 3120 Query 132102 GAATGTCATCGATATTCTGTACAGATCCGTTGTTTTTGATAATTTTCATCATCAGTTCTG 132161 |||| ||||| || |||| ||| ||| || |||||| | | ||| ||| | Sbjct 3119 GAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTCATTTC-G 3061 Query 132162 TCG------AGTACACGTTGCAGTCTACGAGTTTATCGACGAGATGTTGATTTACTAT-T 132214 || || |||||| |||| | |||| | | ||| ||||| || || | Sbjct 3060 TCATCCCATAGATCACGTT-CAGTTAAATCTTTTAGCAA----ATGATGATTGACAATAT 3006 Query 132215 TGATATTCACCCGATAAGACTCTTC--GTACGTACAAATTACTAGTAAACGGCTCGAACG 132272 ||| |||| ||||||| || | || ||| || | ||| ||| | ||||| || | Sbjct 3005 TGA-ATTCTCCCGATAGCACACGTCTGGTA--TAAATATTGGAGGTATAAGGCTCAAATG 2949 Query 132273 ATTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATGTAGGCAATCAATAATG 132332 |||| || || ||||| ||||| || || | || || ||||| ||| | | || | Sbjct 2948 ATTCATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAG 2889 Query 132333 AATTGCGCAGCCCGTG---TATGGCCATTTGCCGTTTAAGCTCGTCCCAGTTCCACAGAT 132389 |||| || | || || | || |||| | ||| | ||| ||||||||||| || Sbjct 2888 AATTTCGTACACCATGCTGTTTG---ATTTTCTCTTTCAACTCTGTCCAGTTCCACAAAT 2832 Query 132390 CATTCGATTGAGAGATATTCCACAAATCAAACTGTAA-ATGACCGCTACTTGCAGGAGAT 132448 | | | ||| ||||||||| ||| | |||| ||| || ||||| | || | Sbjct 2831 CGGTAG---GAGTTTTATTCCACATATCGTATTGTAGTATGCCCT-TACTTACCGGGCAG 2776 Query 132449 CCGTTATAAGAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTCTGACTCAGGGCA 132508 ||| ||||| || || | || | || || | ||| || || || Sbjct 2775 CCGGGATAAGTTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCG 2716 Query 132509 CCATAATAAATAGTCTCTGAGATTTTTCTATT---CAATTCCCTTGCTTGTTGACTGTCG 132565 |||||||||||||| || | |||| | ||| ||| || || | || || ||| Sbjct 2715 CCATAATAAATAGTTTCGAAAATTTGTTGATTTAACAAAGCC---GCCTTTTCGCTTTCG 2659 Query 132566 TAGGGCAAAT---TTAAAATAGCGAACGCATCGGCAAGTCCCTGAATGCCGATACCGATG 132622 ||||| ||| ||||||| || | |||||||| ||||| | || || || || Sbjct 2658 TAGGGGAAACGCATTAAAATC---AATGTGTCGGCAAGACCCTGCACACCTATGCCAATA 2602 Query 132623 GGTCTATGTTTAAAATTCGATACTTGTGCGCTA-GTCAGCGGATAAAAGTTTTTGTCTAT 132681 || | ||| | ||| ||| | || || | ||| ||||||||||| ||||||| Sbjct 2601 GGACGATGACGTAGATTAGATT-TCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTAT 2543 Query 132682 TATTTTATTGAGATTGTTAGTGACAACTCTAGCCACTTTATATAGCGATTCAAAGTCAAA 132741 ||||| |||||||| || || | ||| ||| || || | || | |||||| || Sbjct 2542 GATTTTGTTGAGATTTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAA 2483 Query 132742 GTTTTTAGTCCTTTTGTTGGCA-AAACA-ATTGACGGCAATCGAGGCCAAATTGCATACG 132799 |||| || | | || ||||| ||| | ||| || ||||||||||| || ||| Sbjct 2482 TGTTTT-----TTCAGGCGTCACAAACATATTAAGGGCTATTGAGGCCAAATTACACACG 2428 Query 132800 GCTGTCTCTTTATTATCGCTATACTGTACGATTTCTGCACACAAATTACTGTTTCGAATA 132859 ||| |||| | || ||||| ||| ||||| | |||||| |||||| ||| Sbjct 2427 GCTATCTCATCGGGTGCGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAAT- 2369 Query 132860 ACTCCCAAGtttttttGATTGTTTTTCT--CGTTTAC-GTTATCTTTATGCAACATGTAC 132916 | | |||| | ||||| | ||| ||| || |||| | ||| || | ||||||||| Sbjct 2368 AGTGCCAA--TATTTTGCTGGTTACTCTTACGATTACAGGCATCCTTGTACAACATGTAG 2311 Query 132917 GGACCTCCGGTTTCGACCTGAATTTCGATAATTTTTCTGTGAAGATCTAACGCCAAAATT 132976 ||| || ||||| || ||| ||| || || |||| | ||| | Sbjct 2310 GGAGTACCTGTTTCTACTTGAGCTTCAATTATGGCAAACCAAAGAGCCTGGGCCTTGA-C 2252 Query 132977 TGTTC-TTTAAACTTGCCCTGAGTCTCGTAACTTTCGTAT--AATCGCTCAAATTCTTCG 133033 || | || ||||| | | | || || || |||| ||| || ||||| | Sbjct 2251 GGTACGGTTTGCTTTGCCTTCATTTTCATA--CTTGGTATACAATTCTTCGAATTCCGCA 2194 Query 133034 CCATAGCAGTCGTTCAAACCGGGACACTCGTCAGGACACATCAATGACCATTTTTCTCCT 133093 || | || | || ||| ||||| | || |||||||| || ||||| | | | | Sbjct 2193 CCCCAAACTTCCTGCAGACCAGGACATTTGTGGGGACACATTAACGACCAATCTCCATTT 2134 Query 133094 GCGCTCACCCTTTTCATGAACAACGAAGGTGTCCACATGGCAAAAAATAAATCGCGAGCC 133153 | || |||||||| ||||| ||| |||||| |||| | |||| ||| | ||| Sbjct 2133 TCTTCTACTCTTTTCATAAACAAATCGGGTATCCACAGGGCATAGAATAGATCTCTAGCT 2074 Query 133154 TTCATATCTTCCGCGCCCATATTTCGTTTCAAGTCCaaaaaagtaaaaaTGTCTGCATGC 133213 | |||||| ||| ||||| || || |||||||| |||||| |||| |||| Sbjct 2073 CTGTGCTCTTCCTTGCCGGTATTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGC 2014 Query 133214 CAAGGCTCGATATATACGGCCAAAGCGCCT 133243 |||||||| | ||| | ||| || || ||| Sbjct 2013 CAAGGCTCCAAATAAATGGCAAATGCTCCT 1984 >seq125840 Length=3442 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| |||||||| || | |||||| | ||||||||| | || Sbjct 538 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGCCTTAC 597 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| || || ||||||||||| || || || |||||| Sbjct 598 GACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 657 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | || ||| || ||| | ||||||| | | | | ||| || || Sbjct 658 CAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAAT 717 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||| ||||| || | ||||| || Sbjct 718 ATCCAAAAGGAATCCACCTTACATTTGGT 746 >seq64788 Length=4825 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||||||||| |||||| | ||||| | || ||||| ||| | Sbjct 1815 ATGCAAATATTCGTTAAAACATTAACGGGAAAAACAATTACATTAGAGGTCGAA-CCATC 1757 Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 | | ||||| || | || ||| || || ||||||||||| || || || ||||| Sbjct 1756 GGATACCATAGAAAATGTTAAAGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCA 1697 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGA-AACGTCAGCGATTAT 24167 |||| | | |||| || || || ||| | |||||| ||| | | ||| |||||| Sbjct 1696 ACAGCGTTTAATTTTCGCTGGTAAACAATTGGAAGATGGACGTACATTGTC--CGATTAC 1639 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 ||||| |||||||| || || |||| || || ||| Sbjct 1638 AACATCCAAAAAGAGTCGACCCTTCACTTGGTCTTA 1603 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || ||||| ||||| ||| | || ||| | || || ||| | | Sbjct 2043 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCTTCC 1984 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || ||| || ||| ||||| ||||| || ||||| |||||| Sbjct 1983 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 1924 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||||| || ||| || ||| | ||||| | | | | ||||| || Sbjct 1923 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 1864 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||||||| | ||||| || ||| | ||| | || || Sbjct 1863 ATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGG 1817 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 ||||||||| | || || || ||||||||||| || | || ||| | || ||||| || Sbjct 2274 AAAATGCAAATCTTCGTGAAGACATTAACTGGCAAGACCATCACCTTAGAGGTCGA-ACC 2216 Query 24048 AAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | | || || || || | ||||| || ||| || || || ||||| || || || Sbjct 2215 ATCTGATACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCCCCAGA 2156 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| | || |||| | ||| || ||||| ||||| | | | | |||||| Sbjct 2155 TCAACAACGTCTAATTTTTGCCGGTAAACAACTTGAAGACGGACGCACTTTGTCCGATTA 2096 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||||||||||||||| ||||||| || Sbjct 2095 CAACATTCAAAAAGAATCTACTCTTCATTTGGT 2063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428901078214050