Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq125840 125 7e-24
seq64788 122 8e-23
seq177482 86.0 6e-12
>seq125840
Length=3442
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || ||||||| ||| || |||||||| || ||||| ||| |
Sbjct 764 CCACCACGAAGACGGAGTACCAAATGTAAGGTGGATTCCTTTTGGATATTGTAGTCGGAC 705
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || | || || || ||| |||| ||||| || || || || ||
Sbjct 704 AAGGTGCGACCATCTTCCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGA 645
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||||||||| |||||| ||||| | || | || ||| | |||||
Sbjct 644 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTGTCGTAAGGCTCGACT 585
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| ||| ||||| |||| |||||| ||||| ||||||||
Sbjct 584 TCCAAGGTAATGGTCTTACCAGTTAAAGTTTTGACGAAGATCTGCAT 538
>seq64788
Length=4825
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||||| ||| ||||| | ||| || |||||||| || ||||| ||
Sbjct 1133 CCACCGCGGAGACGCAACACCAAATGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGAG 1192
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| | |||||| || ||| |||| ||||| || ||||| ||||||
Sbjct 1193 AGGGTGCGACCATCCTCCAACTGCTTACCGGCGAAGATCAAACGTTGTTGGTCTGGAGGG 1252
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| || ||||| | || | ||||| | | || |
Sbjct 1253 ATACCTTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTATCTGATGGTTCTACC 1312
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | |||||| || || | ||||| ||||||||||||||
Sbjct 1313 TCCAAGGTGATGGTTTTTCCAGTCAACGTTTTCACGAAAATCTGCAT 1359
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| | || ||||| | ||| |||||||||||||||||||||||| |
Sbjct 1361 CCACCGCGGAGACGTAAGACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAATCGGAC 1420
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || | || || || ||| |||||||||| || || || || ||
Sbjct 1421 AATGTACGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGGGGA 1480
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| |||||||| || ||||| ||| | | || | ||| |||| | || |
Sbjct 1481 ATACCTTCTTTATCTTGAATTTTGGCCTTTACATTTTCAATAGTGTCGGATGGTTCAACT 1540
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| ||||| || || | || || ||||||||||||||
Sbjct 1541 TCTAAGGTAATTGTTTTTCCTGTCAAGGTCTTAACGAAAATCTGCAT 1587
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| | || || || | ||||||||| ||||| |||||||||||| |
Sbjct 1589 CCACCGCGGAGACGTAAGACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAATCGGAC 1648
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || | || || || ||| | ||||||||||| || || || ||
Sbjct 1649 AATGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATTAAACGCTGTTGATCTGGGGGA 1708
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||||||||| |||||| |||| | | | || | ||||| | | ||||
Sbjct 1709 ATACCTTCTTTGTCTTGGATTTT-AGCTTTAACATTTTCTATGGTATCCGATGGTTCGAC 1767
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | |||| ||||| || |||| ||||| ||||| || ||||||
Sbjct 1768 CTCTAATGTAATTGTTTTTCCCGTTAATGTTTTAACGAATATTTGCATG 1816
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||||||| | || ||||| | || || || ||||| || ||||||||
Sbjct 1816 GCCACCACGCAAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTGTAATCAGA 1875
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| |||||| ||| || | || || || ||| | || ||||| || || || |||||
Sbjct 1876 CAATGTGCGCCCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGG 1935
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185
||||||||| ||||| ||| ||| |||| | | | || | |||||||| | ||| |
Sbjct 1936 GATTCCTTCCTTGTC-TTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAA 1994
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | |||||| || || | || || || || || |||||
Sbjct 1995 CCTCCAAGGTGATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 2043
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||||| || || || | || |||||||||||||| |||||||||
Sbjct 164 GCCACCACGGAGACGCAATACCAAGTGGAGAGTGGACTCCTTTTGAATATTGTAATCGGA 223
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || || || || | |||||| || ||| |||| ||||| |||||||| || ||
Sbjct 224 CAAAGTACGGCCATCTTCCAACTGCTTACCGGCGAAGATCAAACGTTGCTGGTCTGGGGG 283
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185
|| ||||| || || ||| ||| |||| | | | || | || || | | || |
Sbjct 284 AATACCTTCCTTATC-CTGAATTTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAA 342
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | |||||| || || | || || ||||||||||||||
Sbjct 343 CTTCCAAGGTGATGGTTTTGCCAGTCAAGGTCTTAACGAAAATCTGCAT 391
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || ||||| | || || || |||||||||||||||||| |
Sbjct 2045 CCACCACGAAGACGTAGAACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAC 2104
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||| || || || || || || | |||| ||| || || || || ||
Sbjct 2105 AAAGTGCGTCCGTCTTCAAGTTGTTTACCGGCAAAAATTAGACGTTGTTGATCTGGGGGA 2164
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||||| ||||| | || | |||||| | | ||||
Sbjct 2165 ATGCCCTCCTTATCTTGAATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCGACC 2224
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || |||| || || ||||| || |||||
Sbjct 2225 TCTAAGGTGATGGTCTTGCCAGTTAATGTCTTCACGAAGATTTGCAT 2271
>seq177482
Length=2829
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | |||| || || || | || || || |||||||| ||||| |||
Sbjct 1653 CCACCACGAAGGCGCAATACCAAGTGCAATGTTGATTCTTTTTGAATATTGTAGTCGGAA 1594
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || || | ||||| || || | || ||||| ||||| || || ||
Sbjct 1593 AGTGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGCTGATCTGGTGGA 1534
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|||||||||||||| ||| | | || |||| | || | ||| || | || ||||
Sbjct 1533 ATTCCTTCTTTGTC-CTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAGGGTTCGAC 1475
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | ||| ||||| || || ||||| ||||| |||||||||
Sbjct 1474 CTCAAGAGTGATGGTCTTACCCGTCAGGGTTTTGACGAATATCTGCATG 1426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 470847459398400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |