Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq125840 86.0 5e-12
seq64788 84.2 2e-11
>seq125840
Length=3442
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
||||||| ||| | ||||| |||||||| || |||||||||| || ||| | ||
Sbjct 749 AGTACCAAATGTAAGGTGGATTCCTTTTGGATATTGTAGTCGGACAAGGTGCGACCATCT 690
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
||||||||||| || || | || | || ||||| || || | || ||||||||
Sbjct 689 TCCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCT 630
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|||| ||| || | | | |||||| ||||| ||||| ||| |||||
Sbjct 629 TGGATTTTAGCCTTGACATTTTCAATGGTGTCGTAAGGCTCGACTTCCAAGGTAATGGTC 570
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || | |||||||| || ||||||||
Sbjct 569 TTACCAGTTAAAGTTTTGACGAAGATCTGCAT 538
>seq64788
Length=4825
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 16726 TACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTC 16785
||||| ||||| || || || |||||||| ||||| || | || || |||| ||
Sbjct 1834 TACCAAATGCAATGTAGATTCTTTTTGTATATTGTAATCAGACAATGTGCGCCCGTCTTC 1893
Query 16786 CAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGC 16845
||||||||| || || |||| | || ||||| || ||| | || || |||||
Sbjct 1894 CAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTG 1953
Query 16846 AATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||||| ||| || || | | | ||| ||| ||||| |||| ||||||||||
Sbjct 1954 AATTTTAGCT--TTAACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAGGTGATGGTT 2011
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || |||| || |||||||| || |||||
Sbjct 2012 TTGCCAGTCAATGTCTTGACAAAGATTTGCAT 2043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404112891154900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |