Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq154177 96.9 7e-15
seq93291 96.9 7e-15
seq32007 93.3 9e-14
seq141351 91.5 3e-13
seq145144 89.7 1e-12
seq116351 89.7 1e-12
seq109579 89.7 1e-12
seq93973 89.7 1e-12
seq34370 89.7 1e-12
seq20405 89.7 1e-12
>seq154177
Length=6269
Score = 96.9 bits (106), Expect = 7e-15
Identities = 289/443 (65%), Gaps = 6/443 (1%)
Strand=Plus/Minus
Query 218566 CGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCC 218625
||||| || ||| | |||||||||| | ||||| || |||||| || | || |
Sbjct 2550 CGTTCCATACCCTGTTTGGTGGATGGTTTTAAGCCCGGTCAACGTAAGGTCATGTTCACT 2491
Query 218626 GCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCC 218685
||||| || ||| | ||| | ||||| || || ||||||||| || |
Sbjct 2490 TGCTTCAAACGTAACGACAAACGCGAAGTCAAGGTGGCCCAACTTTCTGGTTCGGTGGCT 2431
Query 218686 GAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCA 218745
||||| |||| ||||||||||||||| | ||||| |||| || ||||
Sbjct 2430 GAAATGTCTGCTTACCATCACGGTGAGGTGTCGCTGCAAATGACCATCGTTAATTTGGCC 2371
Query 218746 CAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCT 218805
||| | |||||||| ||| ||||| || ||||| || | |||||||| ||| ||
Sbjct 2370 CAGAATTATGTGGGTTCTAATAACATCAATTTGCTAGAGCCTAGAGGTCAGTTCGGTACT 2311
Query 218806 CGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCC 218865
||| | |||||| |||||| | ||| || | ||||| || || | |||||||
Sbjct 2310 CGTTTGACGGGTGGCAAGGATTGCGCTAGCGCTCGTTATATTTTCACTATTATGTCGCCA 2251
Query 218866 GTGACGCGCCAGGTGTTCAATCAGGCCGATGATG-TGCTC--CTTAAGTATCTTGAGGAC 218922
|| | || | | | ||| ||| || |||| | | ||| || | ||| | ||
Sbjct 2250 CTGGCTCGTCTGATATTCCATC---CCCATGACGATCCTCTGCTGCAATATGAAGTCGAT 2194
Query 218923 GATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAAT 218982
||||| ||| || || | |||||| |||| ||| || | | | || |||
Sbjct 2193 GATGGCCAGAAGATCGAACCTCAATGGTATATGCCCATTATACCCATGATATTGGTTAAT 2134
Query 218983 GGTGCCAATGGTATCGGGACAGG 219005
|||||| ||||||| || || ||
Sbjct 2133 GGTGCCGATGGTATTGGTACTGG 2111
>seq93291
Length=1280
Score = 96.9 bits (106), Expect = 7e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 953 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 1012
Query 142561 AGCCCCACATCGGGCAGAAGT 142581
|||||||| | |||| ||||
Sbjct 1013 AGCCCCACGTTGGGCGCAAGT 1033
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 125 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 184
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 185 CCCCACGTTGGGC 197
>seq32007
Length=2174
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 997 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1056
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 1057 GCCCCACGTTGGGC 1070
>seq141351
Length=2689
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142051 ATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110
||||| || ||||||| ||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 1205 ATGTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGA 1146
Query 142111 CCCCCGCCAGAGA 142123
|||||| || ||
Sbjct 1145 TCCCCGCAAGGGA 1133
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||| || ||||||| ||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 182 TGTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGAT 123
Query 142112 CCCCGCCAGAGA 142123
|||||| || ||
Sbjct 122 CCCCGCAAGGGA 111
>seq145144
Length=1099
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 739 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 680
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 679 CCCACGTTGGGC 668
>seq116351
Length=1614
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 168 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 109
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 108 CCCACGTTGGGC 97
>seq109579
Length=1669
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 545 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 486
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 485 CCCACGTTGGGC 474
>seq93973
Length=1052
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 292 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 233
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 232 CCCACGTTGGGC 221
>seq34370
Length=1488
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 905 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 964
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 965 CCCACGTTGGGC 976
>seq20405
Length=2411
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 832 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 891
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 892 CCCACGTTGGGC 903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1025235759405910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |