Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq154177 96.9 7e-15 seq93291 96.9 7e-15 seq32007 93.3 9e-14 seq141351 91.5 3e-13 seq145144 89.7 1e-12 seq116351 89.7 1e-12 seq109579 89.7 1e-12 seq93973 89.7 1e-12 seq34370 89.7 1e-12 seq20405 89.7 1e-12 >seq154177 Length=6269 Score = 96.9 bits (106), Expect = 7e-15 Identities = 289/443 (65%), Gaps = 6/443 (1%) Strand=Plus/Minus Query 218566 CGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCC 218625 ||||| || ||| | |||||||||| | ||||| || |||||| || | || | Sbjct 2550 CGTTCCATACCCTGTTTGGTGGATGGTTTTAAGCCCGGTCAACGTAAGGTCATGTTCACT 2491 Query 218626 GCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCC 218685 ||||| || ||| | ||| | ||||| || || ||||||||| || | Sbjct 2490 TGCTTCAAACGTAACGACAAACGCGAAGTCAAGGTGGCCCAACTTTCTGGTTCGGTGGCT 2431 Query 218686 GAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCA 218745 ||||| |||| ||||||||||||||| | ||||| |||| || |||| Sbjct 2430 GAAATGTCTGCTTACCATCACGGTGAGGTGTCGCTGCAAATGACCATCGTTAATTTGGCC 2371 Query 218746 CAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCT 218805 ||| | |||||||| ||| ||||| || ||||| || | |||||||| ||| || Sbjct 2370 CAGAATTATGTGGGTTCTAATAACATCAATTTGCTAGAGCCTAGAGGTCAGTTCGGTACT 2311 Query 218806 CGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCC 218865 ||| | |||||| |||||| | ||| || | ||||| || || | ||||||| Sbjct 2310 CGTTTGACGGGTGGCAAGGATTGCGCTAGCGCTCGTTATATTTTCACTATTATGTCGCCA 2251 Query 218866 GTGACGCGCCAGGTGTTCAATCAGGCCGATGATG-TGCTC--CTTAAGTATCTTGAGGAC 218922 || | || | | | ||| ||| || |||| | | ||| || | ||| | || Sbjct 2250 CTGGCTCGTCTGATATTCCATC---CCCATGACGATCCTCTGCTGCAATATGAAGTCGAT 2194 Query 218923 GATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAAT 218982 ||||| ||| || || | |||||| |||| ||| || | | | || ||| Sbjct 2193 GATGGCCAGAAGATCGAACCTCAATGGTATATGCCCATTATACCCATGATATTGGTTAAT 2134 Query 218983 GGTGCCAATGGTATCGGGACAGG 219005 |||||| ||||||| || || || Sbjct 2133 GGTGCCGATGGTATTGGTACTGG 2111 >seq93291 Length=1280 Score = 96.9 bits (106), Expect = 7e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 953 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 1012 Query 142561 AGCCCCACATCGGGCAGAAGT 142581 |||||||| | |||| |||| Sbjct 1013 AGCCCCACGTTGGGCGCAAGT 1033 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 125 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 184 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 185 CCCCACGTTGGGC 197 >seq32007 Length=2174 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 997 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1056 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 1057 GCCCCACGTTGGGC 1070 >seq141351 Length=2689 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142051 ATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110 ||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||||||| Sbjct 1205 ATGTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGA 1146 Query 142111 CCCCCGCCAGAGA 142123 |||||| || || Sbjct 1145 TCCCCGCAAGGGA 1133 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||| || ||||||| ||| ||||||||||||||||||||||||||| |||||||||| Sbjct 182 TGTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGAT 123 Query 142112 CCCCGCCAGAGA 142123 |||||| || || Sbjct 122 CCCCGCAAGGGA 111 >seq145144 Length=1099 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 739 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 680 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 679 CCCACGTTGGGC 668 >seq116351 Length=1614 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 168 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 109 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 108 CCCACGTTGGGC 97 >seq109579 Length=1669 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 545 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 486 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 485 CCCACGTTGGGC 474 >seq93973 Length=1052 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 292 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 233 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 232 CCCACGTTGGGC 221 >seq34370 Length=1488 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 905 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 964 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 965 CCCACGTTGGGC 976 >seq20405 Length=2411 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 832 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 891 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 892 CCCACGTTGGGC 903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1025235759405910