Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq154177 109 1e-18
>seq154177
Length=6269
Score = 109 bits (120), Expect = 1e-18
Identities = 231/342 (68%), Gaps = 2/342 (1%)
Strand=Plus/Plus
Query 297254 GGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTCGAACCATTCACC 297313
||||||| | | ||| || || |||||||| ||||| || ||| | |||||| |||
Sbjct 2081 GGATTGTGATTGTAGATCTTGGTAGACCAACCAGTACCAATACCATCGGCACCATTAACC 2140
Query 297314 AGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCATCATAC 297373
| || | || |||| |||| ||| | | ||||||||||| | || |||||
Sbjct 2141 AATATCATGGGTATAATGGGCATATACCATTGAGGTTCGATCTTCTGGCCATCATCGACT 2200
Query 297374 AGATATTTCAGAAGATTATCGTCCGTATCGACGAAA-ACCTGTCGAGTCTGAGGGTTCAG 297432
||||| ||| ||| |||||| | || | || | | | |||| | | || ||
Sbjct 2201 TCATATTGCAGCAGAGGATCGTCA-TGGGGATGGAATATCAGACGAGCCAGTGGCGACAT 2259
Query 297433 TTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAA 297492
| ||||||||||| || || || ||| |||||| |||||| ||| | | ||||||
Sbjct 2260 AATAGTGAAAATATAACGAGCGCTAGCGCAATCCTTGCCACCCGTCAAACGAGTACCGAA 2319
Query 297493 CTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTT 297552
||| || ||| | | | ||||||||||| || ||||||| ||| || | ||
Sbjct 2320 CTGACCTCTAGGCTCTAGCAAATTGATGTTATTAGAACCCACATAATTCTGGGCCAAATT 2379
Query 297553 CACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGC 297594
||||||||| |||||| || | || || || || || ||
Sbjct 2380 AACGATGGTCATTTGCAGCGACACCTCACCGTGATGGTAAGC 2421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1100089055318500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |