Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq154177 109 1e-18 >seq154177 Length=6269 Score = 109 bits (120), Expect = 1e-18 Identities = 231/342 (68%), Gaps = 2/342 (1%) Strand=Plus/Plus Query 297254 GGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTCGAACCATTCACC 297313 ||||||| | | ||| || || |||||||| ||||| || ||| | |||||| ||| Sbjct 2081 GGATTGTGATTGTAGATCTTGGTAGACCAACCAGTACCAATACCATCGGCACCATTAACC 2140 Query 297314 AGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCATCATAC 297373 | || | || |||| |||| ||| | | ||||||||||| | || ||||| Sbjct 2141 AATATCATGGGTATAATGGGCATATACCATTGAGGTTCGATCTTCTGGCCATCATCGACT 2200 Query 297374 AGATATTTCAGAAGATTATCGTCCGTATCGACGAAA-ACCTGTCGAGTCTGAGGGTTCAG 297432 ||||| ||| ||| |||||| | || | || | | | |||| | | || || Sbjct 2201 TCATATTGCAGCAGAGGATCGTCA-TGGGGATGGAATATCAGACGAGCCAGTGGCGACAT 2259 Query 297433 TTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAA 297492 | ||||||||||| || || || ||| |||||| |||||| ||| | | |||||| Sbjct 2260 AATAGTGAAAATATAACGAGCGCTAGCGCAATCCTTGCCACCCGTCAAACGAGTACCGAA 2319 Query 297493 CTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTT 297552 ||| || ||| | | | ||||||||||| || ||||||| ||| || | || Sbjct 2320 CTGACCTCTAGGCTCTAGCAAATTGATGTTATTAGAACCCACATAATTCTGGGCCAAATT 2379 Query 297553 CACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGC 297594 ||||||||| |||||| || | || || || || || || Sbjct 2380 AACGATGGTCATTTGCAGCGACACCTCACCGTGATGGTAAGC 2421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1100089055318500