Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq64788 100 3e-16
seq186851 95.1 1e-14
seq137565 93.3 5e-14
seq61366 93.3 5e-14
seq140220 91.5 2e-13
seq139936 91.5 2e-13
seq95733 91.5 2e-13
seq38282 91.5 2e-13
seq138662 89.7 6e-13
seq35688 89.7 6e-13
seq60626 87.8 2e-12
seq37893 87.8 2e-12
seq5851 87.8 2e-12
seq185244 86.0 7e-12
seq175424 84.2 2e-11
seq40071 84.2 2e-11
>seq64788
Length=4825
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
|||||| ||||| || | ||| ||||||||||||||||||||| | || ||| || |
Sbjct 176 ACGCAATACCAAGTGGAGAGTGGACTCCTTTTGAATATTGTAATCGGACAAAGTACGGCC 235
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || | ||||||||| ||||| || | || |||||||| | || | | |||||
Sbjct 236 ATCTTCCAACTGCTTACCGGCGAAGATCAAACGTTGCTGGTCTGGGGGAATACCTTCCTT 295
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
||| ||| |||| | ||| | | | | ||||| | ||| || || | ||||
Sbjct 296 ATCC-TGAATTTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACTTCCAAGGTGA 354
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||||||||| || | ||||| || || || |||||
Sbjct 355 TGGTTTTGCCAGTCAAGGTCTTAACGAAAATCTGCAT 391
Score = 100 bits (110), Expect = 3e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 41991 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 42050
||||| || |||||||||||||| || ||||| ||||||||||||| || || |||
Sbjct 1826 AAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTGTAATCAGACAATGTGCGC 1885
Query 42051 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCC 42110
|||| || | || ||||| ||||| || | || || || || | || | | |||
Sbjct 1886 CCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGGGATTCCTTCC 1945
Query 42111 TTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 42169
|||| | ||| |||| | ||| | | | | || ||| | || || || | ||
Sbjct 1946 TTGT-CTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAGGT 2004
Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||||||||||| || | ||||| ||||||||||||||
Sbjct 2005 GATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 2043
Score = 86.0 bits (94), Expect = 7e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||||||| | || || |||||||| |||||||| | || ||| || |||| ||
Sbjct 2063 ACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGACAAAGTGCGTCCGTCTTCA 2122
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|| || ||||| || || || || || || || || | || | || |||||| || ||
Sbjct 2123 AGTTGTTTACCGGCAAAAATTAGACGTTGTTGATCTGGGGGAATGCCCTCCTTATCT-TG 2181
Query 42120 ATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
| |||| | |||| | | | || || | ||| || || | |||||||| ||
Sbjct 2182 AATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCGACCTCTAAGGTGATGGTCTT 2241
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212
||| |||| ||||| || |||||||||||||||
Sbjct 2242 GCCAGTTAATGTCTTCACGAAGATTTGCATTTTC 2275
>seq186851
Length=1651
Score = 95.1 bits (104), Expect = 1e-14
Identities = 72/85 (85%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054
|| ||||| |||||| || | | ||| |||||| ||||||||||||||||||||| |
Sbjct 975 ATAAAAAAAATTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 1034
Query 57055 TACTCACCACTATACTACCGAGGAT 57079
||||||||||||||||| |||||||
Sbjct 1035 TACTCACCACTATACTATCGAGGAT 1059
>seq137565
Length=1157
Score = 93.3 bits (102), Expect = 5e-14
Identities = 72/85 (85%), Gaps = 3/85 (4%)
Strand=Plus/Minus
Query 56998 AAAAATT---TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054
||||||| |||||| || | | ||| |||||| ||||||||||||||||||||| |
Sbjct 929 AAAAATTGTATTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 870
Query 57055 TACTCACCACTATACTACCGAGGAT 57079
||||||||||||||||| |||||||
Sbjct 869 TACTCACCACTATACTATCGAGGAT 845
>seq61366
Length=1478
Score = 93.3 bits (102), Expect = 5e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 57001 AATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 57060
|||| ||||| || | | ||| |||||| ||||||||||||||||||||| |||||||
Sbjct 681 AATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCA 622
Query 57061 CCACTATACTACCGAGGAT 57079
||||||||||| |||||||
Sbjct 621 CCACTATACTATCGAGGAT 603
>seq140220
Length=1645
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 185 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 126
Query 57066 ATACTACCGAGGATT 57080
|||||| ||||||||
Sbjct 125 ATACTATCGAGGATT 111
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 775 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 716
Query 57066 ATACTACCGAGGAT 57079
|||||| |||||||
Sbjct 715 ATACTATCGAGGAT 702
>seq139936
Length=1620
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 185 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 126
Query 57066 ATACTACCGAGGATT 57080
|||||| ||||||||
Sbjct 125 ATACTATCGAGGATT 111
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 702 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 643
Query 57066 ATACTACCGAGGAT 57079
|||||| |||||||
Sbjct 642 ATACTATCGAGGAT 629
>seq95733
Length=2222
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||
Sbjct 970 AAAAAACATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 911
Query 57058 TCACCACTATACTACCGAGGATT 57080
|||||||||||||| ||||||||
Sbjct 910 TCACCACTATACTATCGAGGATT 888
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 162 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 103
Query 57066 ATACTACCGAGGAT 57079
|||||| |||||||
Sbjct 102 ATACTATCGAGGAT 89
>seq38282
Length=1633
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 133 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 74
Query 57066 ATACTACCGAGGATT 57080
|||||| ||||||||
Sbjct 73 ATACTATCGAGGATT 59
>seq138662
Length=2599
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 492 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 433
Query 57066 ATACTACCGAGGAT 57079
|||||| |||||||
Sbjct 432 ATACTATCGAGGAT 419
>seq35688
Length=3808
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct 3061 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 3120
Query 57066 ATACTACCGAGGAT 57079
|||||| |||||||
Sbjct 3121 ATACTATCGAGGAT 3134
>seq60626
Length=1529
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1291 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1350
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 1351 TACTATCGAGGAT 1363
>seq37893
Length=2337
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1306 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1365
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 1366 TACTATCGAGGAT 1378
>seq5851
Length=1034
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 149 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 90
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 89 TACTATCGAGGAT 77
>seq185244
Length=4071
Score = 86.0 bits (94), Expect = 7e-12
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 3531 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 3472
Query 57066 ATACTACCGAGGATTGAATATATAACTTGA 57095
|||||| ||||||| || | ||| ||||
Sbjct 3471 ATACTATCGAGGATGTTATGTGTAATTTGA 3442
>seq175424
Length=1535
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 906 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 847
Query 57066 ATACTACCGAGGAT 57079
|||||| |||||||
Sbjct 846 ATACTATCGAGGAT 833
>seq40071
Length=1725
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1121 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1062
Query 57066 ATACTACCGAGGAT 57079
|||||| |||||||
Sbjct 1061 ATACTATCGAGGAT 1048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541871675498400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |