Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq64788 161 7e-35
seq125840 100 2e-16
seq177482 98.7 7e-16
>seq64788
Length=4825
Score = 161 bits (178), Expect = 7e-35
Identities = 176/232 (76%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007
||||||| ||||| | ||| || ||||| | ||||| ||||||||||| ||||||| |
Sbjct 1815 TGCCACCACGCAAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTGTAAT--C 1872
Query 15008 TGAGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065
|| || | | | ||||||| |||||||| || ||| | |||||||| ||||| ||
Sbjct 1873 AGACAATGTGCGCCCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGG 1932
Query 15066 TGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125
|| |||||||||||||| |||||| ||| ||| |||| ||||||||| | ||
Sbjct 1933 AGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTC 1992
Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || ||||| |||||||| || |||| || || ||||| |||||||||
Sbjct 1993 AACCTCCAAGGTGATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCATA 2044
Score = 152 bits (168), Expect = 4e-32
Identities = 173/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | | ||| || |||||||||||||| || ||||| |||||||||||| |
Sbjct 1361 CCACCGCGGAGACGTAAGACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAATCG--G 1418
Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| || | ||||| |||||||| |||||| | || ||||| ||||| || |
Sbjct 1419 ACAATGTACGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGGG 1478
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||| ||||| || || ||||||| |||||| |||| ||||| ||| ||| |
Sbjct 1479 GAATACCTTCTTTATCTTGAATTTTGGCCTTTACATTTTCAATAGTGTCGGATGGTTCAA 1538
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| ||||||||||| ||||| ||||||| || || || ||||| ||||||
Sbjct 1539 CTTCTAAGGTAATTGTTTTTCCTGTCAAGGTCTTAACGAAAATCTGCATA 1588
Score = 141 bits (156), Expect = 7e-29
Identities = 172/230 (75%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | | ||| || || |||||||| || |||||||| |||||||||||| |
Sbjct 1589 CCACCGCGGAGACGTAAGACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAATCG--G 1646
Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| || | ||||| |||||||| |||||| | || ||||||||||| || |
Sbjct 1647 ACAATGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATTAAACGCTGTTGATCTGGGG 1706
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTAT-TTTCT 15126
|||| ||||| ||||| ||||| ||| ||| ||||||| ||||| | || |||
Sbjct 1707 GAATACCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCTATGGTATC-CGATGGTTCG 1765
Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| ||||| ||||| ||||| || || | ||||| || || ||||||||
Sbjct 1766 ACCTCTAATGTAATTGTTTTTCCCGTTAATGTTTTAACGAATATTTGCAT 1815
Score = 114 bits (126), Expect = 9e-21
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | | || ||| |||||||| ||||| |||||||| ||||||||||||
Sbjct 2045 CCACCACGAAGACGTAGAACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAC 2104
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | ||||||| | |||||| || || | || | ||| ||||| || |||
Sbjct 2105 AAAGTGCGTCCGTCTTCAAGTTGTTTACCGGCAAAAATTAGACGTTGTTGATCTGGGGGA 2164
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || ||||| || |||||| || ||| |||| |||||||| ||| ||
Sbjct 2165 ATGCCCTCCTTATCTTGAATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCGACC 2224
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15182
|||||||| ||||| || || || | || || || || |||||||| || ||
Sbjct 2225 TCTAAGGTGATGGTCTTGCCAGTTAATGTCTTCACGAAGATTTGCATTTTCGA 2277
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024
|| || ||||||||||| || || ||||| || ||||| || ||| | | | ||
Sbjct 1148 AACACCAAATGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGAGAGGGTGCGACCATCC 1207
Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084
|| || || || || ||| | |||||||| |||||||| || || |||||||| ||
Sbjct 1208 TCCAACTGCTTACCGGCGAAGATCAAACGTTGTTGGTCTGGAGGGATACCTTCCTTATCT 1267
Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144
|| || || ||| |||| || ||||| |||||| || ||||| ||||||
Sbjct 1268 TGGATCTTAGCCTTGACATTTTCAATGGTATCTGATGGTTCTACCTCCAAGGTGATGGTT 1327
Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || |||| ||||| || ||||| ||||||
Sbjct 1328 TTTCCAGTCAACGTTTTCACGAAAATCTGCATA 1360
>seq125840
Length=3442
Score = 100 bits (110), Expect = 2e-16
Identities = 150/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025
|| ||||| | ||| || || ||||| || ||||| ||| || || || | ||||
Sbjct 746 ACCAAATGTAAGGTGGATTCCTTTTGGATATTGTAGTCG--GACAAGGTGCGACCATCTT 689
Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085
| |||||||| || ||| | |||||||| ||||| || ||||| ||||| |||||
Sbjct 688 CCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTT 629
Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145
||||| || ||| |||| || || ||| | || || || ||||||||||| |
Sbjct 628 GGATTTTAGCCTTGACATTTTCAATGGTGTCGTAAGGCTCGACTTCCAAGGTAATGGTCT 569
Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|||| || | |||||| || || || |||||
Sbjct 568 TACCAGTTAAAGTTTTGACGAAGATCTGCAT 538
>seq177482
Length=2829
Score = 98.7 bits (108), Expect = 7e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15039
|| || |||||||| || ||||| ||| || | | | ||||| ||||| || |||
Sbjct 1623 GTTGATTCTTTTTGAATATTGTAGTCGGAAAGTGTGCGACCATCTTCCAATTGCTTTCCA 1564
Query 15040 GCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTT 15099
|| | |||||||| || || || |||||||||||| ||||| ||| ||| |||
Sbjct 1563 GCAAAAATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 1504
Query 15100 ACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTT 15159
||| |||| ||||| || ||| || || | || ||||| ||||| ||||| |||
Sbjct 1503 ACATTTTCGATAGTGTCCGAGGGTTCGACCTCAAGAGTGATGGTCTTACCCGTCAGGGTT 1444
Query 15160 TTTACAAAAATTTGCAT 15176
|| || || || |||||
Sbjct 1443 TTGACGAATATCTGCAT 1427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356531702730350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |