Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq41982 93.3 5e-14
>seq41982
Length=5201
Score = 93.3 bits (102), Expect = 5e-14
Identities = 237/356 (67%), Gaps = 15/356 (4%)
Strand=Plus/Minus
Query 116236 AAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 116295
||||| ||| || || ||||| || ||||| | |||||| || ||||| | | ||||
Sbjct 2643 AAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGATTA 2584
Query 116296 GACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 116355
|| || | || | || |||||||| || | || || | | || |||||||||
Sbjct 2583 GATTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGATTTTTG 2524
Query 116356 GTGACAACCTTTGTGAT-TTCATGAAGCTTTTCGTAATCAAAACTGCGA--GTCTCTTCA 116412
|| | || || || | || | || |||| ||| | | ||| || | ||||
Sbjct 2523 GTAATGACTTTAGTAACATTTTTTAA---TTTCTTAA-----AGT-CGAATGTTTTTTCA 2473
Query 116413 T---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469
| ||| || || |||||| ||||| |||| ||||||||| | |||||||
Sbjct 2472 GGCGTCACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCATCGGGT 2413
Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529
| | ||||||| ||||||||||||||| || | |||||| ||||| | || |
Sbjct 2412 GCGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCAATATTTTGC 2353
Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585
|| || ||| ||||| ||||||||||| | ||| || || || || || ||
Sbjct 2352 TGGTTACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTTC 2297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611992527411600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |