Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq41982 102 1e-16 >seq41982 Length=5201 Score = 102 bits (112), Expect = 1e-16 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 ||| ||||| || || || || || || | || || | | |||| ||| |||||||| Sbjct 3364 CTTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCC 3305 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 |||||||| ||| | ||| | || | || || || | || ||| | |||||| Sbjct 3304 GGTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGG 3245 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017 || |||| || || || | ||||| ||||| |||||||||| |||| ||||| || | Sbjct 3244 TTCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAG-CGCCACGATCGGCTG 3186 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 |||| | ||| ||||||| ||||||||||| || ||||| Sbjct 3185 CCATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTT 3143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793192061205600