Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq154177 102 1e-16 seq91934 87.8 2e-12 >seq154177 Length=6269 Score = 102 bits (112), Expect = 1e-16 Identities = 282/425 (66%), Gaps = 8/425 (2%) Strand=Plus/Plus Query 167357 AACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAA 167416 |||| ||||||||||| || | ||| || ||||| | ||| |||| | | ||||| || Sbjct 2109 AACCAGTACCAATACCATCGGCACCATTAACCAATATCATGGGTATAATGGGCATATACC 2168 Query 167417 AGTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAGAATGGCATCATCTTTGG 167476 | | ||||| || | |||||||| | || | || | | ||| || | || Sbjct 2169 ATTGAGGTTCGATCTTCTGGCCATCATCGACTTCATATTGCAGCAGAGGATCGTCATGGG 2228 Query 167477 GATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCT--TCGTAAAGATGTACCTCGTCTGAGA 167534 ||| ||| | | |||||| ||| | | | || || || || | | || Sbjct 2229 GATGGAATATCAGACGAGCCAG--TGGCGACATAATAGTGAAAATATAACGAGCGCTAG- 2285 Query 167535 CGCA-TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGA 167593 |||| |||||||||||| | | || ||||| || ||||| | ||||| || | ||||| Sbjct 2286 CGCAATCCTTGCCACCCGTCAAACGAGTACCGAACTGACCTCTAGGCTCTAGCAAATTGA 2345 Query 167594 TGTTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGT-TTCAGCGAGGGAAACT 167652 ||||||| || ||| ||||| | |||||| || ||||| || | || || || || Sbjct 2346 TGTTATTAGAACCCACATAATTCTGGGCCAAATTAACGATGGTCATTTGC-AGCGACACC 2404 Query 167653 TCGCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATC 167712 || ||||| ||||||||| | |||||||||| | | | | || || ||||| | Sbjct 2405 TCACCGTGATGGTAAGCAGACATTTCAGCCACCGAACCAGAAAGTTGGGCCACCTTGACT 2464 Query 167713 TCATCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGA 167772 || |||| || || ||| || | |||| ||||| |||||| || || | | Sbjct 2465 TCGCGTTTGTCGTTACGTTTGAAGCAAGTGAACATGACCTTACGTTGACCGGGCTTAAAA 2524 Query 167773 CCATC 167777 ||||| Sbjct 2525 CCATC 2529 >seq91934 Length=4437 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 119479 GTTTAAACAACTCTACGGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCAT 119538 ||||||||| || ||||| || ||| | || || || ||||| || | ||||| Sbjct 3413 GTTTAAACATTAACACAGCAAAATCACAATGTAAACCCTCGTCACGAGAAATCAACTCAT 3354 Query 119539 TACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAAC 119598 | ||| ||| |||||||| || || | ||||||||||||||| || | | ||||| Sbjct 3353 TGGAGAATGTAAGGCCAGGCATAAGACCACGTTTCTTTAGCCAAAATATCGAAGCAAAAC 3294 Query 119599 TTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAA 119654 | ||| ||||| |||||||||||| ||| || || | | || ||| ||||| Sbjct 3293 TGCCACTGAAGAAAATGCCCTCCACAGCGGCAAATGCAATAATGCGTTCACCAAAA 3238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587521891878000