Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq14118 111 2e-19 >seq14118 Length=4545 Score = 111 bits (122), Expect = 2e-19 Identities = 348/524 (66%), Gaps = 24/524 (5%) Strand=Plus/Minus Query 154593 TTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGT 154652 || ||||| |||||||| | |||| || ||||| ||||| || | || | ||||| Sbjct 1883 TTGTGTGAGATCACAGGATATGATAAAATTTCATTCCAACCGAATTCTGGTGCTCAGGGA 1824 Query 154653 GAGTATGCAGGACTGTTAGCAATCCAAGCA--TACCATCAAGGATCAGGA-GATGATAAA 154709 ||||| ||||| ||| ||| || | ||| |||||| || | | | || | | | Sbjct 1823 GAGTACGCAGGTCTGAGAGCTATTC--GCAGTTACCATGAAC-ACCGCAATGAGGGTCAC 1767 Query 154710 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATG 154769 | || | ||| | || || || || |||||||| |||||||| ||| ||| Sbjct 1766 CGCAACATTTGTCTAATTCCTATTTCTGCCCATGGAACCAATCCTGCATCAGCTCAGATG 1707 Query 154770 GCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT----GATGGTAACATAGACATCAA 154825 ||||| |||||||||| | ||| | || | ||||| | ||| || || Sbjct 1706 GCAGGTATGAAAGTTGAAC----CAATTCGCATACTTCCCGATGGAAGCATTGATATGGC 1651 Query 154826 AGATCTAGAGAAGAAAGCAATCATGAATACATTTGAACT--GTCATGTATTATGATTACA 154883 | || | || ||| ||| ||| || | | | | ||| || | ||||| ||| Sbjct 1650 CCACTTACGTGATAAGGCA-TCA-GAACACGCTCGTAATTTGTCGTGCTTAATGATCACA 1593 Query 154884 TACCCATCTACACATGG-TGTATTTGAAACTAACATTAGACAGATATGTAAGATCG--TT 154940 || || ||||| ||||| |||||| ||| ||| | | | || || | |||| || Sbjct 1592 TATCCCTCTAC-CATGGGTGTATTCGAAGA-AACTGTGGCC-GAAATTTGCGATCTGATT 1536 Query 154941 CATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTA 155000 ||| |||||||||| || ||||| ||||| || ||| | ||||| ||||| || || Sbjct 1535 CATAGGCATGGTGGTCAAGTGTATCTAGATGGCGCCAATATGAATGCTCAGGTCGGTCTG 1476 Query 155001 GCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGT 155060 ||| |||| ||||| ||||| | ||| |||| | || ||||| |||||| Sbjct 1475 TGTCGTCCAGGTGACTATGGCAGTGATGTGTCCCATTTAAATCTGCACAAAACTTTCTGT 1416 Query 155061 ATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||| ||||| ||||| ||||| || | ||||| || || || Sbjct 1415 ATTCCTCATGGTGGTGGCGGTCCCGGTATGGGTCCAATTGGCGT 1372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577782795998400