Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq91934 233 2e-56
seq39385 93.3 5e-14
>seq91934
Length=4437
Score = 233 bits (258), Expect = 2e-56
Identities = 477/695 (69%), Gaps = 14/695 (2%)
Strand=Plus/Minus
Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069
||| || |||||||| || |||| |||| | || | | || || ||||| | || ||
Sbjct 3565 ATCAGCTACAAATTCAATATATTCCGACATCAATTTACAATTCATGCCAATCAAATTGAC 3506
Query 37070 TGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128
|| | || || | ||||| | || ||| ||| ||||||| || | | ||| |
Sbjct 3505 GGGCAAAGCTTCGGTTAAGAACTC-TTGTTCAATTTTTACAGCTTCCGTTATTATTT--- 3450
Query 37129 CAATAACTTCT-TCA--GTTGGGG-GATATTTTAAATATTTAAACAATAA-ACATGCAAA 37183
| | | |||| ||| | |||| | | | |||||| |||||||| ||| ||| |||||
Sbjct 3449 CGGTTA-TTCTCTCACGGCTGGGACGTTGTATTAAATGTTTAAACATTAACACA-GCAAA 3392
Query 37184 ATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCAT 37243
||||||||||||||| || || | | ||||| ||||| || || || | || |||||
Sbjct 3391 ATCACAATGTAAACCCTCGTCACGAGAAATCAACTCATTGGAGAATGTAAGGCCAGGCAT 3332
Query 37244 TAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTC 37303
| ||| | ||| || | ||||||||| | |||||| ||| |||||||| || ||
Sbjct 3331 AAGACCACGTTTCTTTAGCCAAAATATCGAAGCAAAACTGCCACTGAAGAAAATGCCCTC 3272
Query 37304 AACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGA-AATCCAtt 37362
|| || |||||||| | || ||| ||| ||| ||| | || | || ||||||
Sbjct 3271 CACAGCGGCAAATGCAATAATGCGTTCACCAAAA-TTGGCCGATTTTGAGCCAATCCAAG 3213
Query 37363 tttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAA 37422
||| |||||| ||||| |||||| | || |||||||| || || ||||||
Sbjct 3212 ACATTGCCCAATCGGCCTTGCGCTTAACAGCTGGCATCGTTTCAATGGCATTAAAGAGAT 3153
Query 37423 AGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGT 37482
| | || ||| | |||| | || || | || || | | |||||||||||||||||
Sbjct 3152 AATCGCGTTGTTCGCGATCTTTAATGTAGCTGTCGATCAAAATACTATACATTTCAGAGT 3093
Query 37483 GAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACAT 37542
| | |||||| || || || || |||||||| ||||| | || || | | ||| || |
Sbjct 3092 GTACATTTTCCATGGCAATTTGGAAACCATAGAAACAGCGTGCCTCTGTAACTTGTACCT 3033
Query 37543 CGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAG 37602
| | |||| | | | | | |||||||| || || ||||| ||| |||||||| |
Sbjct 3032 CTTGGGAAAAACGTTCAACAAGATTTTCATTGACAATACCATCGGAAGCAGCAAAGAAGG 2973
Query 37603 CAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATAT 37662
| ||||||| | ||||| | | |||| | | | ||||| ||| || | |||
Sbjct 2972 CCAGAACATGTGAGATAAAGTAACGCTCATTGTCGGTGAGTTTTTCCCAGTCCGAATTAT 2913
Query 37663 CTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697
|||| || | ||| ||||| || || |||||||||
Sbjct 2912 CTTTAGAGAGATCTACTTCTTCTACAGTCCAAAAA 2878
>seq39385
Length=6125
Score = 93.3 bits (102), Expect = 5e-14
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 153287 AGGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGC 153346
|||||||||||| |||||||||||||| || |||||||| | ||| | || |||||
Sbjct 2662 AGGTGTTTTACACACAAAATTTTGGATTTCGGACAATAAACACATTTATCTGGGCAGTGC 2603
Query 153347 TAATATGGATTGGAGATCACTAACTCAAGTAAAAGA 153382
|||||||| |||||||| |||| ||||| |||||
Sbjct 2602 AAATATGGACTGGAGATCTTTAACCCAAGTCAAAGA 2567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590854443860400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |