Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq91934 114 2e-20 >seq91934 Length=4437 Score = 114 bits (126), Expect = 2e-20 Identities = 344/526 (65%), Gaps = 4/526 (1%) Strand=Plus/Minus Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 ||||| || | || || || ||||| || || | | | |||||||| || ||| Sbjct 3396 GCAAAATCACAATGTAAACCCTCGTCACGAGAAATCAACTCATTGGAGAATGTAAGGCCA 3337 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | | || ||||| || || | || ||| |||| |||||| ||| Sbjct 3336 GGCATAAGACCACGTTTCTTTAGCCAAAATATCGAAGCAAAACTGCCACTGAAGAAAATG 3277 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGC-GTTCTTGTCTGAGAT 48312 |||||||| || || || || | | | || || ||| || | | ||| | || Sbjct 3276 CCCTCCACAGCGGCAAATGCAATAATGCGTTCACCAAAATTGGCCGATTTTGAGCCA-AT 3218 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 ||| || | ||||| || ||||| ||| | ||||||||| || ||||| || Sbjct 3217 CCAAGACATTGCCCAATCGGCCTTGCGCTTAACAGCTGGCATCGTTTCAATGGCATTAAA 3158 Query 48373 GAGCTTCTTGCACTCACCTGCG-TCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCT 48431 ||| | | || | | ||| || || ||| | || || | ||||| | Sbjct 3157 GAGATAATCGCGTTGTTC-GCGATCTTTAATGTAGCTGTCGATCAAAATACTATACATTT 3099 Query 48432 CAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCT 48491 ||||||| ||||| || || || || ||||| || ||||| | ||||| || | Sbjct 3098 CAGAGTGTACATTTTCCATGGCAATTTGGAAACCATAGAAACAGCGTGCCTCTGTAACTT 3039 Query 48492 GCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAA 48551 | || ||| ||| || | || | ||||| |||||||| || ||||| |||||||||| Sbjct 3038 GTACCTCTTGGGAAAAACGTTCAACAAGATTTTCATTGACAATACCATCGGAAGCAGCAA 2979 Query 48552 AGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCT 48611 ||||||| || |||||| | || | ||||| |||| |||||| | |||| || Sbjct 2978 AGAAGGCCAGAACATGTGAGATAAAGTAACGCTCATTGTCGGTGAGTTTTTCCCAGTCCG 2919 Query 48612 GTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 ||||| || || |||||||| |||||||| || || || Sbjct 2918 AATTATCTTTAGAGAGATCTACTTCTTCTACAGTCCAAAAAGATGC 2873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929232961958400