Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq41982 134 7e-27 >seq41982 Length=5201 Score = 134 bits (148), Expect = 7e-27 Identities = 182/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||||| | ||| |||||| |||||| || ||| | | |||||| ||||| || ||| Sbjct 2160 GGACACATTAACGACCAATCTCCATTTTCTTCTACTCTTTTCATAAACAAATCGGGTATC 2101 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 |||| ||||| |||| |||||| ||||| ||||| || ||| ||| || |||| | Sbjct 2100 CACAGGGCATAGAATAGATCTCTAGCTCTGTGCTCTTCCTTGCCGGTATTTTTCTTTAAA 2041 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || || || |||||||||||||| ||||| || || ||||| || ||||| ||| Sbjct 2040 TCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATGGCAAATGCTCCTGGA 1981 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 | ||| || || ||||||||||| || | ||| | || || || | | ||| || Sbjct 1980 CGTTTGCCGCCGCCTTGATCTACATAGCGGGCAACATTGTTAAACACCCTAAGCATGGGC 1921 Query 26132 ACTAATCCAGTTGA 26145 || | |||| |||| Sbjct 1920 ACCAGTCCATTTGA 1907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252430893973250