Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq14118 122 1e-22
>seq14118
Length=4545
Score = 122 bits (134), Expect = 1e-22
Identities = 353/526 (67%), Gaps = 28/526 (5%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|| ||||| ||||| | || ||||| ||||| ||||| ||||||||||| || || ||
Sbjct 1372 ACGCCAATTGGACCCATACCGGGACCGCCACCACCATGAGGAATACAGAAAGTTTTGTGC 1431
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| ||||| ||| | ||||| |||||||||| ||| ||||| ||||| |||
Sbjct 1432 AGATTTAAATGGGACACATCACTGCCATAGTCACCTGGACGACACAGACCGACCTGAGCA 1491
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA--CGATCTTACATA 138360
|| | ||| || ||||| ||||| || |||||||||| ||||| |||| | ||
Sbjct 1492 TTCATATTGGCGCCATCTAGATACACTTGACCACCATGCCTATGAATCAGATCGCAAATT 1551
Query 138361 TCTGTCTGATGTTTGTTTCAAATACA-CCATGAGTCGATGGATATGTAATCATAATACAT 138419
|| | | | |||| ||| |||||| ||||| || || |||||||| ||||| | ||
Sbjct 1552 TCGGCCACA-GTTT-CTTCGAATACACCCATG-GTAGAGGGATATGTGATCATTAAGCAC 1608
Query 138420 G--AGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGC 138477
| | | | | | || ||| ||| ||| || | || | || || ||| | |
Sbjct 1609 GACAAATTACGAGCGTGTTC-TGA-TGCCTTATCACGTAAGTGGGCCATATCAATGCTTC 1666
Query 138478 CATC----ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACT--AG 138531
|||| | || | ||| | |||||||||| |||||||| ||| || |
Sbjct 1667 CATCGGGAAGTATGCGAATTG----GTTCAACTTTCATACCTGCCAT--CTGAGCTGATG 1720
Query 138532 CAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCT 138590
||||||| |||||||| || || || || ||||| | || | | | | || |
Sbjct 1721 CAGGATTGGTTCCATGGGCAGAAATAGGAATTAGACAAATGTTGCGGTGACCCTCATTGC 1780
Query 138591 GATCCTTGATGATA--TGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTG 138648
| | || ||| || ||| | || ||| ||| ||||| ||||| ||||| | || |
Sbjct 1781 GGT-GTTCATGGTAACTGC--GAATAGCTCTCAGACCTGCGTACTCTCCCTGAGCACCAG 1837
Query 138649 CGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCACATAA 138694
|| ||||| ||||| || |||| | |||||||| ||||| ||
Sbjct 1838 AATTCGGTTGGAATGAAATTTTATCATATCCTGTGATCTCACACAA 1883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577568925325200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |