Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq14118 122 1e-22 >seq14118 Length=4545 Score = 122 bits (134), Expect = 1e-22 Identities = 353/526 (67%), Gaps = 28/526 (5%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | || ||||| ||||| ||||| ||||||||||| || || || Sbjct 1372 ACGCCAATTGGACCCATACCGGGACCGCCACCACCATGAGGAATACAGAAAGTTTTGTGC 1431 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||||| ||| | ||||| |||||||||| ||| ||||| ||||| ||| Sbjct 1432 AGATTTAAATGGGACACATCACTGCCATAGTCACCTGGACGACACAGACCGACCTGAGCA 1491 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA--CGATCTTACATA 138360 || | ||| || ||||| ||||| || |||||||||| ||||| |||| | || Sbjct 1492 TTCATATTGGCGCCATCTAGATACACTTGACCACCATGCCTATGAATCAGATCGCAAATT 1551 Query 138361 TCTGTCTGATGTTTGTTTCAAATACA-CCATGAGTCGATGGATATGTAATCATAATACAT 138419 || | | | |||| ||| |||||| ||||| || || |||||||| ||||| | || Sbjct 1552 TCGGCCACA-GTTT-CTTCGAATACACCCATG-GTAGAGGGATATGTGATCATTAAGCAC 1608 Query 138420 G--AGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGC 138477 | | | | | | || ||| ||| ||| || | || | || || ||| | | Sbjct 1609 GACAAATTACGAGCGTGTTC-TGA-TGCCTTATCACGTAAGTGGGCCATATCAATGCTTC 1666 Query 138478 CATC----ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACT--AG 138531 |||| | || | ||| | |||||||||| |||||||| ||| || | Sbjct 1667 CATCGGGAAGTATGCGAATTG----GTTCAACTTTCATACCTGCCAT--CTGAGCTGATG 1720 Query 138532 CAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCT 138590 ||||||| |||||||| || || || || ||||| | || | | | | || | Sbjct 1721 CAGGATTGGTTCCATGGGCAGAAATAGGAATTAGACAAATGTTGCGGTGACCCTCATTGC 1780 Query 138591 GATCCTTGATGATA--TGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTG 138648 | | || ||| || ||| | || ||| ||| ||||| ||||| ||||| | || | Sbjct 1781 GGT-GTTCATGGTAACTGC--GAATAGCTCTCAGACCTGCGTACTCTCCCTGAGCACCAG 1837 Query 138649 CGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCACATAA 138694 || ||||| ||||| || |||| | |||||||| ||||| || Sbjct 1838 AATTCGGTTGGAATGAAATTTTATCATATCCTGTGATCTCACACAA 1883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577568925325200