Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq41982 282 4e-71 seq125840 140 3e-28 seq64788 140 3e-28 seq177482 134 1e-26 >seq41982 Length=5201 Score = 282 bits (312), Expect = 4e-71 Identities = 730/1104 (66%), Gaps = 24/1104 (2%) Strand=Plus/Minus Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213 ||||| |||||||| | ||| |||| || |||||||| || |||| ||||||||| || Sbjct 3363 TTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCCG 3304 Query 138214 GTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGT 138273 || ||||| || || |||||| || | || || || || | | |||| | ||| Sbjct 3303 GTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGGT 3244 Query 138274 TTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333 | |||| | ||| || ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct 3243 TCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGCC 3184 Query 138334 ATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGT 138393 || | ||| | ||| |||||||| || ||||| |||||||||||||||| | Sbjct 3183 ATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATCT 3124 Query 138394 CGCGGTATTGTTGCAATATTTTGAAT-GCTCC-CGTTGGCCGCAATGATGCGATTTCTCA 138451 || ||| | || ||| || | || || | | | ||| || | ||| ||| Sbjct 3123 TTGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTG--GAAATAATTCTGTTTTTCA 3066 Query 138452 TGTCATCGTTGTACAGATTCAACTTGA-TCAAGTCGTTTATCAGATATCTGTTTATGACC 138510 | || || | | |||| || || | | || || |||| || || || | | Sbjct 3065 TTTCGTCATCCCATAGAT-CACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATA 3007 Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570 | ||||| || | | || || | ||||| ||| ||| |||||||||| ||| Sbjct 3006 TTGAATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGAT 2947 Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630 || || || |||| || || || || | || || ||||| |||| | | |||| Sbjct 2946 TCATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAA 2887 Query 138631 TTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTA 138690 || |||| ||| || | |||||| || || | | | ||||| |||||||||| || Sbjct 2886 TTTCGTACACCATGCTGTTTGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTA 2827 Query 138691 GGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTAC 138750 || |||| |||||||||||||| |||| || ||| |||| | || | ||| || Sbjct 2826 GGAGTTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGATAA 2767 Query 138751 GAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAA 138810 | || || ||| | || || | ||| || || || || | || ||||| ||| Sbjct 2766 GTTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATAATAA 2707 Query 138811 ATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGG 138870 ||||||||| ||| || ||||| | ||| |||| |||| ||||| || | || Sbjct 2706 ATAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAAACGC 2647 Query 138871 AGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGA 138930 | | | || | |||||| || || ||||| || | || | ||| ||||| || ||| Sbjct 2646 ATTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGA 2587 Query 138931 TTTGACGCTTTTGCGGCTTC---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAA 138987 || || ||| ||| || | ||||||| |||| | || ||||||||||| | | Sbjct 2586 TTAGA---TTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGA 2530 Query 138988 TTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTG 139047 ||| | || ||||| || |||||| | ||| ||| |||| || Sbjct 2529 TTTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGT------TTTT 2476 Query 139048 TCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACT 139107 || | |||| ||||| | || | || ||||| | || ||||| || | Sbjct 2475 TC-----AGGCGTC-ACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATC 2422 Query 139108 TCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCT 139167 || ||||| || || || |||||||| | |||||| ||||| ||||| || || || Sbjct 2421 TCATCGGGTGCGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCA 2362 Query 139168 AAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCA 139227 | |||||| || || || || || ||||| ||||| ||||| | ||| || || || || Sbjct 2361 ATATTTTGCTGGTTACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCT 2302 Query 139228 GTTTCCACTTGTGTCTCTATAATG 139251 ||||| ||||| | || || ||| Sbjct 2301 GTTTCTACTTGAGCTTCAATTATG 2278 >seq125840 Length=3442 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| |||| ||||| || ||||| | ||||| || | Sbjct 537 GATGCAGATCTTCGTCAAAACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGCCTTA 596 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || || || ||||||||||||||||| || || || ||||| Sbjct 597 CGACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCA 656 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||||||||||| ||||| ||||| |||| ||| | | | |||| || || || Sbjct 657 ACAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAA 716 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 || ||||||||||| || |||| ||||| Sbjct 717 TATCCAAAAGGAATCCACCTTACATTTGGT 746 >seq64788 Length=4825 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | |||||| | || || ||||| || || | || |||||| | | Sbjct 1359 ATGCAGATTTTCGTGAAAACGTTGACTGGAAAAACCATCACCTTGGAGGTAGAACCATCA 1300 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || || ||||||||||| || ||||| || ||||| || ||| Sbjct 1299 GATACCATTGAAAATGTCAAGGCTAAGATCCAAGATAAGGAAGGTATCCCTCCAGACCAA 1240 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||||||||| ||||| || ||| |||||||| | | | | || || || || Sbjct 1239 CAACGTTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGTCGCACCCTCTCTGACTACAAT 1180 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || || ||||||||||| | ||||| || Sbjct 1179 ATCCAAAAGGAATCCACCCTTCATTTGGTGTTGCGTCTCCGCGGTGG 1133 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || | || || ||||| ||||| | ||||| ||| | || Sbjct 1587 ATGCAGATTTTCGTTAAGACCTTGACAGGAAAAACAATTACCTTAGAAGTTGAACCATCC 1528 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| ||||| || || ||||| |||||||| || || || |||||| Sbjct 1527 GACACTATTGAAAATGTAAAGGCCAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 1468 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATAA 24882 |||||||| ||||| || || ||||| |||| ||| || |||| ||| ||||| || Sbjct 1467 CAACGTTTAATCTTCGCTGGTAAACAATTGGAAGATG-GACGTACATTGTCCGATTACAA 1409 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||| || || || || ||||| || || | ||||| || Sbjct 1408 CATTCAAAAGGAGTCTACCCTTCATTTGGTCTTACGTCTCCGCGGTGG 1361 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| |||| || ||||| ||||| | || || ||| | | Sbjct 1815 ATGCAAATATTCGTTAAAACATTAACGGGAAAAACAATTACATTAGAGGTCGAACCATCG 1756 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || |||||| || ||| || ||||||||||||||||| || || || |||||| Sbjct 1755 GATACCATAGAAAATGTTAAAGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 1696 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 || ||||| || || || || ||||| |||| || | || ||| |||| ||||| || Sbjct 1695 CAGCGTTTAATTTTCGCTGGTAAACAATTGGAAGA-TGGACGTACATTGTCCGATTACAA 1637 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||| || ||||| || |||||||| || || | ||||| || Sbjct 1636 CATCCAAAAAGAGTCGACCCTTCACTTGGTCTTACGTCTCCGCGGTGG 1589 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || | || || ||||| || || | || || || | || Sbjct 2043 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCTTCC 1984 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| || || |||||||| |||||||| ||||| |||||| Sbjct 1983 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 1924 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| || ||||| ||||| |||| || | | | |||| ||||| || Sbjct 1923 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 1864 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || ||||| ||||| ||| | || ||||| || || ||||| || ||| Sbjct 1863 ATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGGC 1816 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || | || || ||||| || || | ||||| ||| | | Sbjct 391 ATGCAGATTTTCGTTAAGACCTTGACTGGCAAAACCATCACCTTGGAAGTTGAACCATCT 332 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| || || || || || ||||| || || || || || Sbjct 331 GACACCATTGAAAATGTTAAAGCTAAAATTCAGGATAAGGAAGGTATTCCCCCAGACCAG 272 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||||||||| ||||| || ||| |||| ||| | | |||| ||||| || Sbjct 271 CAACGTTTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGTACTTTGTCCGATTACAAT 212 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||||||||| || || || |||||||| ||||| | || || ||| Sbjct 211 ATTCAAAAGGAGTCCACTCTCCACTTGGTATTGCGTCTCCGTGGTGGC 164 Score = 118 bits (130), Expect = 1e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||||||||| || ||||| || ||||| || ||||||||||||||||| ||||| || Sbjct 1000 AAGATCCAAGATAAGGAAGGTATCCCTCCAGACCAACAACGTTTGATCTTCGCCGGTAAG 941 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||| |||||||| | | | | || || || || || ||||||||||| || || || Sbjct 940 CAGTTGGAGGATGGTCGCACCCTCTCTGACTACAATATCCAAAAGGAATCCACCCTTCAT 881 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| | ||||| || Sbjct 880 TTGGTGTTGCGTCTCCGCGGTGG 858 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || |||| || || || || || | || || ||| | | Sbjct 2271 ATGCAAATCTTCGTGAAGACATTAACTGGCAAGACCATCACCTTAGAGGTCGAACCATCT 2212 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || || || || ||||| || || || || || || |||||| Sbjct 2211 GATACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCCCCAGATCAA 2152 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 |||||| | || |||||||| ||||| || || || || || || |||| ||||| Sbjct 2151 CAACGTCTAATTTTTGCCGGTAAACAACTTGAAGA--CG-GACGCACTTTGTCCGATTAC 2095 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||||||||| ||||| || || || ||||| Sbjct 2094 AACATTCAAAAAGAATCTACTCTTCATTTGGT 2063 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| ||||||| | || || |||||||| || | |||||||| | || Sbjct 163 ATGCAAATCTTCGTTAAAACTTTGACTGGCAAAACTATCACATTGGAAGTAGAGCCTTCC 104 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || || || ||||| || || ||||| || || || ||||| Sbjct 103 GATACCATTGAAAACGTCAAGGCTAAAATCCAGGATAAGGAAGGCATTCCCCCGGATCAG 44 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 ||||||||||| || || || || ||| |||| ||| Sbjct 43 CAACGTTTGATTTTCGCTGGTAAGCAGTTGGAAGAT 8 >seq177482 Length=2829 Score = 134 bits (148), Expect = 1e-26 Identities = 162/217 (75%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || ||||| || || || || || || ||| || | Sbjct 1427 ATGCAGATATTCGTCAAAACCCTGACGGGTAAGACCATCACTCTTGAGGTCGAACCCTCG 1486 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| ||||| || |||||||||||||| || || ||||| Sbjct 1487 GACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCACCAGATCAG 1546 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 ||||||||||| ||||| || || || |||| ||| ||| | || | || || || | Sbjct 1547 CAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGATGGTCG-CACAC-TTTCCGACTACA 1604 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 | |||||||| ||||| ||| | |||||||| ||||| Sbjct 1605 ATATTCAAAAAGAATCAACATTGCACTTGGTATTGCG 1641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448786859062800