Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq41982 282 4e-71
seq125840 140 3e-28
seq64788 140 3e-28
seq177482 134 1e-26
>seq41982
Length=5201
Score = 282 bits (312), Expect = 4e-71
Identities = 730/1104 (66%), Gaps = 24/1104 (2%)
Strand=Plus/Minus
Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213
||||| |||||||| | ||| |||| || |||||||| || |||| ||||||||| ||
Sbjct 3363 TTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCCG 3304
Query 138214 GTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGT 138273
|| ||||| || || |||||| || | || || || || | | |||| | |||
Sbjct 3303 GTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGGT 3244
Query 138274 TTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333
| |||| | ||| || ||||| ||||| ||||||||||||||||| ||||| |||
Sbjct 3243 TCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGCC 3184
Query 138334 ATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGT 138393
|| | ||| | ||| |||||||| || ||||| |||||||||||||||| |
Sbjct 3183 ATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATCT 3124
Query 138394 CGCGGTATTGTTGCAATATTTTGAAT-GCTCC-CGTTGGCCGCAATGATGCGATTTCTCA 138451
|| ||| | || ||| || | || || | | | ||| || | ||| |||
Sbjct 3123 TTGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTG--GAAATAATTCTGTTTTTCA 3066
Query 138452 TGTCATCGTTGTACAGATTCAACTTGA-TCAAGTCGTTTATCAGATATCTGTTTATGACC 138510
| || || | | |||| || || | | || || |||| || || || | |
Sbjct 3065 TTTCGTCATCCCATAGAT-CACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATA 3007
Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570
| ||||| || | | || || | ||||| ||| ||| |||||||||| |||
Sbjct 3006 TTGAATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGAT 2947
Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630
|| || || |||| || || || || | || || ||||| |||| | | ||||
Sbjct 2946 TCATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAA 2887
Query 138631 TTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTA 138690
|| |||| ||| || | |||||| || || | | | ||||| |||||||||| ||
Sbjct 2886 TTTCGTACACCATGCTGTTTGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTA 2827
Query 138691 GGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTAC 138750
|| |||| |||||||||||||| |||| || ||| |||| | || | ||| ||
Sbjct 2826 GGAGTTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGATAA 2767
Query 138751 GAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAA 138810
| || || ||| | || || | ||| || || || || | || ||||| |||
Sbjct 2766 GTTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATAATAA 2707
Query 138811 ATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGG 138870
||||||||| ||| || ||||| | ||| |||| |||| ||||| || | ||
Sbjct 2706 ATAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAAACGC 2647
Query 138871 AGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGA 138930
| | | || | |||||| || || ||||| || | || | ||| ||||| || |||
Sbjct 2646 ATTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGA 2587
Query 138931 TTTGACGCTTTTGCGGCTTC---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAA 138987
|| || ||| ||| || | ||||||| |||| | || ||||||||||| | |
Sbjct 2586 TTAGA---TTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGA 2530
Query 138988 TTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTG 139047
||| | || ||||| || |||||| | ||| ||| |||| ||
Sbjct 2529 TTTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGT------TTTT 2476
Query 139048 TCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACT 139107
|| | |||| ||||| | || | || ||||| | || ||||| || |
Sbjct 2475 TC-----AGGCGTC-ACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATC 2422
Query 139108 TCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCT 139167
|| ||||| || || || |||||||| | |||||| ||||| ||||| || || ||
Sbjct 2421 TCATCGGGTGCGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCA 2362
Query 139168 AAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCA 139227
| |||||| || || || || || ||||| ||||| ||||| | ||| || || || ||
Sbjct 2361 ATATTTTGCTGGTTACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCT 2302
Query 139228 GTTTCCACTTGTGTCTCTATAATG 139251
||||| ||||| | || || |||
Sbjct 2301 GTTTCTACTTGAGCTTCAATTATG 2278
>seq125840
Length=3442
Score = 140 bits (154), Expect = 3e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| |||| ||||| || ||||| | ||||| || |
Sbjct 537 GATGCAGATCTTCGTCAAAACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGCCTTA 596
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | |||| || || || ||||||||||||||||| || || || |||||
Sbjct 597 CGACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCA 656
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||||||||||||| ||||| ||||| |||| ||| | | | |||| || || ||
Sbjct 657 ACAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAA 716
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
|| ||||||||||| || |||| |||||
Sbjct 717 TATCCAAAAGGAATCCACCTTACATTTGGT 746
>seq64788
Length=4825
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | |||||| | || || ||||| || || | || |||||| | |
Sbjct 1359 ATGCAGATTTTCGTGAAAACGTTGACTGGAAAAACCATCACCTTGGAGGTAGAACCATCA 1300
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| || || ||||||||||| || ||||| || ||||| || |||
Sbjct 1299 GATACCATTGAAAATGTCAAGGCTAAGATCCAAGATAAGGAAGGTATCCCTCCAGACCAA 1240
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||||||||||| ||||| || ||| |||||||| | | | | || || || ||
Sbjct 1239 CAACGTTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGTCGCACCCTCTCTGACTACAAT 1180
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| ||||||||||| || || || ||||||||||| | ||||| ||
Sbjct 1179 ATCCAAAAGGAATCCACCCTTCATTTGGTGTTGCGTCTCCGCGGTGG 1133
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || |||| || | || || ||||| ||||| | ||||| ||| | ||
Sbjct 1587 ATGCAGATTTTCGTTAAGACCTTGACAGGAAAAACAATTACCTTAGAAGTTGAACCATCC 1528
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| ||||| || || ||||| |||||||| || || || ||||||
Sbjct 1527 GACACTATTGAAAATGTAAAGGCCAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 1468
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATAA 24882
|||||||| ||||| || || ||||| |||| ||| || |||| ||| ||||| ||
Sbjct 1467 CAACGTTTAATCTTCGCTGGTAAACAATTGGAAGATG-GACGTACATTGTCCGATTACAA 1409
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||| || || || || ||||| || || | ||||| ||
Sbjct 1408 CATTCAAAAGGAGTCTACCCTTCATTTGGTCTTACGTCTCCGCGGTGG 1361
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| |||| || ||||| ||||| | || || ||| | |
Sbjct 1815 ATGCAAATATTCGTTAAAACATTAACGGGAAAAACAATTACATTAGAGGTCGAACCATCG 1756
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || |||||| || ||| || ||||||||||||||||| || || || ||||||
Sbjct 1755 GATACCATAGAAAATGTTAAAGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 1696
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882
|| ||||| || || || || ||||| |||| || | || ||| |||| ||||| ||
Sbjct 1695 CAGCGTTTAATTTTCGCTGGTAAACAATTGGAAGA-TGGACGTACATTGTCCGATTACAA 1637
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| ||||| || ||||| || |||||||| || || | ||||| ||
Sbjct 1636 CATCCAAAAAGAGTCGACCCTTCACTTGGTCTTACGTCTCCGCGGTGG 1589
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || | || || ||||| || || | || || || | ||
Sbjct 2043 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCTTCC 1984
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| || ||| || || |||||||| |||||||| ||||| ||||||
Sbjct 1983 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 1924
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||||||||| || ||||| ||||| |||| || | | | |||| ||||| ||
Sbjct 1923 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 1864
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| ||||| ||||| ||| | || ||||| || || ||||| || |||
Sbjct 1863 ATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGGC 1816
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || |||| || | || || ||||| || || | ||||| ||| | |
Sbjct 391 ATGCAGATTTTCGTTAAGACCTTGACTGGCAAAACCATCACCTTGGAAGTTGAACCATCT 332
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || ||| || || || || || ||||| || || || || ||
Sbjct 331 GACACCATTGAAAATGTTAAAGCTAAAATTCAGGATAAGGAAGGTATTCCCCCAGACCAG 272
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||||||||||| ||||| || ||| |||| ||| | | |||| ||||| ||
Sbjct 271 CAACGTTTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGTACTTTGTCCGATTACAAT 212
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||||||||||| || || || |||||||| ||||| | || || |||
Sbjct 211 ATTCAAAAGGAGTCCACTCTCCACTTGGTATTGCGTCTCCGTGGTGGC 164
Score = 118 bits (130), Expect = 1e-21
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||||||||| || ||||| || ||||| || ||||||||||||||||| ||||| ||
Sbjct 1000 AAGATCCAAGATAAGGAAGGTATCCCTCCAGACCAACAACGTTTGATCTTCGCCGGTAAG 941
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||| |||||||| | | | | || || || || || ||||||||||| || || ||
Sbjct 940 CAGTTGGAGGATGGTCGCACCCTCTCTGACTACAATATCCAAAAGGAATCCACCCTTCAT 881
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| | ||||| ||
Sbjct 880 TTGGTGTTGCGTCTCCGCGGTGG 858
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || |||| || || || || || | || || ||| | |
Sbjct 2271 ATGCAAATCTTCGTGAAGACATTAACTGGCAAGACCATCACCTTAGAGGTCGAACCATCT 2212
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| || || || || ||||| || || || || || || ||||||
Sbjct 2211 GATACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCCCCAGATCAA 2152
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880
|||||| | || |||||||| ||||| || || || || || || |||| |||||
Sbjct 2151 CAACGTCTAATTTTTGCCGGTAAACAACTTGAAGA--CG-GACGCACTTTGTCCGATTAC 2095
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||||||||| ||||| || || || |||||
Sbjct 2094 AACATTCAAAAAGAATCTACTCTTCATTTGGT 2063
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| ||||||| | || || |||||||| || | |||||||| | ||
Sbjct 163 ATGCAAATCTTCGTTAAAACTTTGACTGGCAAAACTATCACATTGGAAGTAGAGCCTTCC 104
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| || || || ||||| || || ||||| || || || |||||
Sbjct 103 GATACCATTGAAAACGTCAAGGCTAAAATCCAGGATAAGGAAGGCATTCCCCCGGATCAG 44
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
||||||||||| || || || || ||| |||| |||
Sbjct 43 CAACGTTTGATTTTCGCTGGTAAGCAGTTGGAAGAT 8
>seq177482
Length=2829
Score = 134 bits (148), Expect = 1e-26
Identities = 162/217 (75%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || ||||| || || || || || || ||| || |
Sbjct 1427 ATGCAGATATTCGTCAAAACCCTGACGGGTAAGACCATCACTCTTGAGGTCGAACCCTCG 1486
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || ||| ||||| || |||||||||||||| || || |||||
Sbjct 1487 GACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCACCAGATCAG 1546
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
||||||||||| ||||| || || || |||| ||| ||| | || | || || || |
Sbjct 1547 CAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGATGGTCG-CACAC-TTTCCGACTACA 1604
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
| |||||||| ||||| ||| | |||||||| |||||
Sbjct 1605 ATATTCAAAAAGAATCAACATTGCACTTGGTATTGCG 1641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448786859062800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |