Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq92191 149 5e-31
seq64788 116 3e-21
seq125840 89.7 4e-13
>seq92191
Length=1998
Score = 149 bits (164), Expect = 5e-31
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491
|||||||| | || ||||| || |||| || || || || ||||| || || || ||
Sbjct 774 TTGTAATCAAATTGAGTTTGAGCACCCAATTCACAACCAAAATACTTGGTTGGATAGGTG 715
Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551
|| || || |||| ||| | || | ||||| ||| ||||| ||||| || || |||||
Sbjct 714 GCTGGTCGGCCAATGGCCCTAGCAACTTCGGCCATATTGACAATGACGGTTTTAATGCCA 655
Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611
|| ||||| || ||||||||||| | |||||||||||||||||||| ||||| |||
Sbjct 654 TTACCCTTGCCCTCGACCTTGGCCAAAATGCGCGGCATTTTGTAGCGATAGAAAATGTCA 595
Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643
| |||||||| ||||| || || | |||||
Sbjct 594 GTGACATTGCGATTAACATTAACGGAACCCAT 563
Score = 82.4 bits (90), Expect = 6e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 34254 GCCGTGATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGAT 34313
||| || |||| || || ||||| |||| | || | | ||||| || || || |
Sbjct 1026 GCCATGGAAACCACAGGCCTTGCAAGACTGAGAAATGGTTTGATTTTTGGCCGAAACAGT 967
Query 34314 GAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATC 34373
| || || || || || || ||||| |||||||| ||| | |||||||||||||| ||
Sbjct 966 TAAATCGGTTTCGGGATTATCGCATTCGGGACACAAGACATATTTGCGGATGAAACCGTC 907
Query 34374 AAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTT 34433
| || || |||| || | | || |||||||| || || ||||| ||||| || ||
Sbjct 906 CAAGAGATCTTGTAGTTTGGCAGCATCATGGGAGCCATTCACAATGAAACGTTCATTCTT 847
>seq64788
Length=4825
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||| || || || ||||||||||| ||| | || |||||| |
Sbjct 2043 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCTTCC 1984
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|||||| | | | || ||| || ||| ||||| ||||| | || ||||||
Sbjct 1983 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 1924
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | | |||| || |||||||| |||| || | | ||| || | ||||||||
Sbjct 1923 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 1864
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| |||||||||||||| ||||| |||| ||| | |||| || ||
Sbjct 1863 ATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGG 1817
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
||||||||||| || || || || ||||| ||||| ||||| ||| | || || ||
Sbjct 2274 AAAATGCAAATCTTCGTGAAGACATTAACTGGCAAGACCATCACCTTAGAGGTCGAACCA 2215
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|||||| | | | || || || ||| || || || ||| | ||| |||
Sbjct 2214 TCTGATACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCCCCAGAT 2155
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|||||| | || |||| ||| |||||||| || || || | | || || | ||||||
Sbjct 2154 CAACAACGTCTAATTTTTGCCGGTAAACAACTTGAAGACGGACGCACTTTGTCCGATTAC 2095
Query 110450 AACATTCAAAAAGAATCTAC 110469
||||||||||||||||||||
Sbjct 2094 AACATTCAAAAAGAATCTAC 2075
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || || || || || || || ||||| |||||| | ||| || || |
Sbjct 1587 ATGCAGATTTTCGTTAAGACCTTGACAGGAAAAACAATTACCTTAGAAGTTGAACCATCC 1528
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| | | | ||||| || ||| || |||||||| | ||| ||||||
Sbjct 1527 GACACTATTGAAAATGTAAAGGCCAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 1468
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | | || | || |||||||| |||| |||| | ||| || | |||||||||
Sbjct 1467 CAACGTTTAATCTTCGCTGGTAAACAATTGGAAGATGGACGTACATTGTCCGATTACAAC 1408
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||| || ||||| | || |||| ||| | || || || ||
Sbjct 1407 ATTCAAAAGGAGTCTACCCTTCATTTGGTCTTACGTCTCCGCGGTGG 1361
>seq125840
Length=3442
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || |||||||||||||| || || ||||||||| | ||| |||||| ||
Sbjct 538 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAGCCTTAC 597
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | || || || || ||||||||||| | ||| ||||||
Sbjct 598 GACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 657
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | | || | || |||||||| |||| |||| | || || | || |||||
Sbjct 658 CAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAAT 717
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481
|| ||||| ||||| || || || ||||
Sbjct 718 ATCCAAAAGGAATCCACCTTACATTTGGT 746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 411847827052430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |