Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq125840 95.1 8e-15
seq64788 89.7 3e-13
>seq125840
Length=3442
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| || | |||| ||||| || || || ||||| || | | |||| ||||
Sbjct 749 AGTACCAAATGTAAGGTGGATTCCTTTTGGATATTGTAGTCGGACAAGGTGCGACCATCT 690
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||| || ||||||||||||| ||||| || ||| | || | || || |||||
Sbjct 689 TCCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCT 630
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| ||||| | | || | || | | |||||| || | ||| ||||||
Sbjct 629 TGGATTTTAGCCTTGACATTTTCAATGGTGTCGTAAGGCTCGACTTCCAAGGTAATGGTC 570
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | || || || |||||||||||
Sbjct 569 TTACCAGTTAAAGTTTTGACGAAGATCTGCAT 538
>seq64788
Length=4825
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||| | ||| |||||| ||||| || || || || | | || |||| |||
Sbjct 183 ACCAAGTGGAGAGTGGACTCCTTTTGAATATTGTAATCGGACAAAGTACGGCCATCTTCC 242
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
| ||||| ||||||||||||| |||||||||||| | || | || ||||| || |
Sbjct 243 AACTGCTTACCGGCGAAGATCAAACGTTGCTGGTCTGGGGGAATACCTTCCTTATCCTGA 302
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
||||| ||| || | | || | ||| | || || || | ||| ||||| ||
Sbjct 303 ATTTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACTTCCAAGGTGATGGTTTTG 362
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | |||||| || || ||||||||
Sbjct 363 CCAGTCAAGGTCTTAACGAAAATCTGCAT 391
Score = 84.2 bits (92), Expect = 1e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| |||| |||| ||||| || || || ||||| || ||| |||| |||| |||
Sbjct 1151 ACCAAATGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGAGAGGGTGCGACCATCCTCC 1210
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
| ||||| ||||||||||||| ||||| |||||| | || | || ||||| || |
Sbjct 1211 AACTGCTTACCGGCGAAGATCAAACGTTGTTGGTCTGGAGGGATACCTTCCTTATCTTGG 1270
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
|| || ||||| | | || | || | || || || | ||| ||||| |||
Sbjct 1271 ATCTTAGCCTTGACATTTTCAATGGTATCTGATGGTTCTACCTCCAAGGTGATGGTTTTT 1330
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | || || || || ||||||||
Sbjct 1331 CCAGTCAACGTTTTCACGAAAATCTGCAT 1359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324908807558690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |