Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_024486.1 Length=43734 Score E Sequences producing significant alignments: (Bits) Value seq194683 86.0 2e-12 >seq194683 Length=1703 Score = 86.0 bits (94), Expect = 2e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 1371 GGTTGTTACGGCAGAATAGCTCCAAGATCCGGTCTAGCGGCAAAGTATTCAATTGATGTG 1430 |||| ||||| ||| |||| || | || ||||| || | ||| | | ||||||||| Sbjct 1207 GGTTCGTACGGTAGAGTAGCGCCTCGCTCTGGTCTGGCTGTTAAGAACTTTATTGATGTG 1148 Query 1431 GGCGCTGGAGTTATTGACCCTGATTATCGTGGAAGTATCAGTGTTGTTTTATTTAATCAT 1490 |||||||||||||||||| ||||| ||||| | | | | ||||| |||| |||||| Sbjct 1147 GGCGCTGGAGTTATTGACGAAGATTACCGTGGCAATCTAGGCGTTGTACTATTCAATCAT 1088 Query 1491 TCGGA 1495 || || Sbjct 1087 TCCGA 1083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139499244915520