Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq64788 109 5e-19
>seq64788
Length=4825
Score = 109 bits (120), Expect = 5e-19
Identities = 150/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | |||||| || || || |||||||| || | ||| ||| | ||||| |
Sbjct 1154 AAATGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGAGAGGGTGCGACCA-TCCTCCAA 1212
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || ||| | || | || || ||||| |||||||| |||||||| || |||
Sbjct 1213 CTGCTTACCGGCGAAGATCAAACGTTGTTGGTCTGGAGGGATACCTTCCTTATCTTGGAT 1272
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | |||| || || | || || || || | ||||| |||||| ||
Sbjct 1273 CTTAGCCTTGACATTTTCAATGGTATCTGATGGTTCTACCTCCAAGGTGATGGTTTTTCC 1332
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||| ||||||||||||||
Sbjct 1333 AGTCAACGTTTTCACGAAAATCTGCAT 1359
Score = 102 bits (112), Expect = 8e-17
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || |||||||||||| || || | | | || || | |||||| ||
Sbjct 195 GTGGACTCCTTTTGAATATTGTAATCGGACAAAGTACGGCCA-TCTTCCAACTGCTTACC 253
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | || |||||||| || || || |||||||| || ||| ||| ||||
Sbjct 254 GGCGAAGATCAAACGTTGCTGGTCTGGGGGAATACCTTCCTTATCC-TGAATTTTAGCTT 312
Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| ||||| | || || || || | ||||| ||||||||| |||| |
Sbjct 313 TAACATTTTCAATGGTGTCAGATGGTTCAACTTCCAAGGTGATGGTTTTGCCAGTCAAGG 372
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||||||||||||
Sbjct 373 TCTTAACGAAAATCTGCAT 391
Score = 100 bits (110), Expect = 3e-16
Identities = 148/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | || || ||||| |||||||||||||| || ||| | ||| || |
Sbjct 1838 AAATGCAATGTAGATTCTTTTTGTATATTGTAATCAGACAATGTGCGCCCGTCTTCCAAT 1897
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| || || ||| |||| | || || || || |||||||| ||||||||||| |||
Sbjct 1898 TGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGGGATTCCTTCCTTGTC-TTGAAT 1956
Query 133575 TTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| |||| | | | |||| || |||| ||||| || || | ||||| |||||||||
Sbjct 1957 TTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAGGTGATGGTTTTGCC 2016
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || || || || |||||
Sbjct 2017 AGTCAATGTCTTGACAAAGATTTGCAT 2043
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || | |||||| || ||| |||| | || ||||| || || || |||||||||||
Sbjct 9 TCTTCCAACTGCTTACCAGCGAAAATCAAACGTTGCTGATCCGGGGGAATGCCTTCCTTA 68
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||| || ||||| | |||| || |||| ||||| || || | ||||
Sbjct 69 TCCTGGATTTTAGCCTTGACGTTTTCAATGGTATCGGAAGGCTCTACTTCCAATGTGATA 128
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661
|||||||| |||| |||||| ||||| || ||||||
Sbjct 129 GTTTTGCCAGTCAAAGTTTTAACGAAGATTTGCATG 164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482227294472400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |