Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq41982 161 9e-35 seq64788 127 2e-24 seq125840 111 1e-19 seq177482 96.9 3e-15 >seq41982 Length=5201 Score = 161 bits (178), Expect = 9e-35 Identities = 702/1093 (64%), Gaps = 33/1093 (3%) Strand=Plus/Minus Query 146551 ACAGTGAATTGTTGTGTGTGCGCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTG 146610 ||||| |||||| | | || || |||||||| | ||||||||||||||| || || Sbjct 3357 ACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCCGGTCTTT 3298 Query 146611 AGGCCACATCGCCACGAGTGATTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCC 146670 | ||| | ||| | | ||||| || |||| | |||| | || || ||| Sbjct 3297 AAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGGTTCAGCC 3238 Query 146671 ACGAAAAGATTAAACGATTGGCTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCA 146730 || | ||| ||||| || |||||||| ||||||||| || ||||| ||||| | | Sbjct 3237 ACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGCCATTTGA 3178 Query 146731 ATCATGCGTTTTGTCTTCATT-TCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCT-- 146787 || || || || | | | |||||| | || || || || | || ||||| Sbjct 3177 ATAGTG-GTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAA---TATCTTT 3122 Query 146788 -GGAATACCTTCAATGTTTTGAATAGAGCCCTTGTGCGCAAAAATAGTGTTTCGTATTTC 146846 ||||| | || ||| ||| |||||||| | | || ||| ||||| ||||| Sbjct 3121 GGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTCATTTC 3062 Query 146847 GGGCGTGTAAAGGTTTAGTTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAA 146906 | | || | ||| | | | || | | |||| |||||||| | | || Sbjct 3061 GTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATATTGAA 3002 Query 146907 CTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATT 146966 || |||| |||||||||||| ||| | |||| || |||||||||| || ||||| Sbjct 3001 TTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGATTCATT 2942 Query 146967 ATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCG 147026 |||||| || ||||| || || | || || ||||| |||| | ||| |||||||| Sbjct 2941 ATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAATTTCG 2882 Query 147027 CAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC--ATCGACGAGGGC 147084 | ||| | | ||| || || ||||| | ||||| |||| |||| | || Sbjct 2881 TACACCATGCTGTTTGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCG--GTAGGA 2824 Query 147085 GTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTA 147144 || |||||||| ||||| || || | || ||| | || | ||| | | || Sbjct 2823 GTTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGATAAGTT 2764 Query 147145 GTGTAGCTTCCGTCGCGCTGC-GCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATAT 147203 || || | || | | | ||||||||| || || || | || ||||| || || Sbjct 2763 TCATAAGGACC-TAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATAATAAAT 2705 Query 147204 GGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAG 147263 |||||| ||||||| |||| | | ||| | |||||| ||||| || | ||||| Sbjct 2704 AGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAAACGCAT 2645 Query 147264 AAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATG-CTT---TT 147319 | | || | ||||| | |||||| | ||| | ||| ||||| ||||| | | || Sbjct 2644 TAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGATT 2585 Query 147320 CG--TTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAG 147377 | || ||| || || || | ||||| ||| || || || |||||||| Sbjct 2584 AGATTTCCTG-GCCTC-----CGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAG 2531 Query 147378 GTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTC 147437 || | |||||||| | |||| | ||||| || || | || | || Sbjct 2530 ATTTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGT----TTTTT 2475 Query 147438 GACACGT-ACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGG 147496 | ||| || | || | ||| || || |||| ||| || ||||| |||| |||| Sbjct 2474 CAGGCGTCACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCATCGG 2415 Query 147497 CGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAA-ATTT 147555 || |||| || ||||| | |||| ||| ||||| || || | | |||| |||| Sbjct 2414 GTGCGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAAT-AGTGCCAATATTT 2356 Query 147556 TGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCG 147615 ||||| || || || ||||| || || || ||| | | |||||| || || || || Sbjct 2355 TGCTGGTTACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTTCT 2296 Query 147616 ACTTGCGTTTCAA 147628 ||||| | ||||| Sbjct 2295 ACTTGAGCTTCAA 2283 >seq64788 Length=4825 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || || |||||||| | | | ||||| |||||||||||||| ||| || ||||| | Sbjct 1373 CGTAAGACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAATCGGACAATGTACGTCCA 1432 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||| | |||||| ||| ||||||||||| || || ||||||||| Sbjct 1433 TCTTCCAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGGGGAATACCTTCTTTA 1492 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| || | | ||| | ||| |||| || || ||||| | || | Sbjct 1493 TCTTGAATTTTGGCCTTTACATTTTCAATAGTGTCGGATGGTTCAACTTCTAAGGTAATT 1552 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || |||| || || | |||||||||||| Sbjct 1553 GTTTTTCCTGTCAAGGTCTTAACGAAAATCTGCAT 1587 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | ||||| |||||||| ||||| ||| || ||||| | Sbjct 177 CGCAATACCAAGTGGAGAGTGGACTCCTTTTGAATATTGTAATCGGACAAAGTACGGCCA 236 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||| ||||||| |||| | ||| || || ||||| || || ||||| ||| Sbjct 237 TCTTCCAACTGCTTACCGGCGAAGATCAAACGTTGCTGGTCTGGGGGAATACCTTCCTTA 296 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| ||| | | ||| | || || | || || ||||| | || | Sbjct 297 TCCTGAATTTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACTTCCAAGGTGATG 356 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||||| || || | |||||||||||| Sbjct 357 GTTTTGCCAGTCAAGGTCTTAACGAAAATCTGCAT 391 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| || || |||||||| | | || |||||||| || ||||| || || || Sbjct 1822 ACGCAAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTGTAATCAGACAATGT 1881 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||||| | |||||||||| | || | ||| |||||||||||||| || || Sbjct 1882 GCGCCCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAGGGATTCC 1941 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || |||||| ||| | | ||| | |||||||| ||||| || || | Sbjct 1942 TTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCCAA 2001 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| ||||||| || || | || || ||||| Sbjct 2002 GGTGATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 2043 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | || ||||||||||||||||| ||| || || || ||||| Sbjct 2062 AACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGACAAAGTGCGTCCGTCTTC 2121 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || |||||||||| | | |||||||| ||||||||||| || ||||| || ||||| Sbjct 2122 AAGTTGTTTACCGGCAAAAATTAGACGTTGTTGATCTGGGGGAATGCCCTCCTTATCTTG 2181 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| || | | ||| | |||||| | || || || || | || | || || Sbjct 2182 AATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCGACCTCTAAGGTGATGGTCTT 2241 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| | || || | ||| || ||||| Sbjct 2242 GCCAGTTAATGTCTTCACGAAGATTTGCAT 2271 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || || ||||| || | | | ||||||||||| |||||||| ||| || ||||| | Sbjct 1601 CGTAAGACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAATCGGACAATGTACGTCCA 1660 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||| | | |||| ||||||||||||||| || || |||||||| Sbjct 1661 TCTTCCAATTGTTTACCAGCGAAAATTAAACGCTGTTGATCTGGGGGAATACCTTCTTTG 1720 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| ||| | | ||| | ||||| | || || || || | || | Sbjct 1721 TCTTGGATTTTAGCTTTAACATTTTCTATGGTATCCGATGGTTCGACCTCTAATGTAATT 1780 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 ||||| || || | ||||| | ||| || |||||| Sbjct 1781 GTTTTTCCCGTTAATGTTTTAACGAATATTTGCATG 1816 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| |||||||| | | | || || ||||| || |||||||| | ||| || | Sbjct 1145 CGCAACACCAAATGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGAGAGGGTGCGACCA 1204 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || | ||| ||||||| |||| | ||| ||||| |||||||| || ||||| ||| Sbjct 1205 TCCTCCAACTGCTTACCGGCGAAGATCAAACGTTGTTGGTCTGGAGGGATACCTTCCTTA 1264 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | ||| | ||||| | || || || || | || | Sbjct 1265 TCTTGGATCTTAGCCTTGACATTTTCAATGGTATCTGATGGTTCTACCTCCAAGGTGATG 1324 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||||| ||||| | |||||||||||| Sbjct 1325 GTTTTTCCAGTCAACGTTTTCACGAAAATCTGCAT 1359 >seq125840 Length=3442 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||||| | | || || ||||| || ||||||||| || ||| || |||||| Sbjct 746 ACCAAATGTAAGGTGGATTCCTTTTGGATATTGTAGTCGGACAAGGTGCGACCATCTTCC 687 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | |||||||||| |||| | ||| ||||||||||| || || |||||||| || Sbjct 686 AATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTGG 627 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | ||| | || ||| ||||| ||||| | || | || ||| Sbjct 626 ATTTTAGCCTTGACATTTTCAATGGTGTCGTAAGGCTCGACTTCCAAGGTAATGGTCTTA 567 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| | |||||| | ||| |||||||| Sbjct 566 CCAGTTAAAGTTTTGACGAAGATCTGCAT 538 >seq177482 Length=2829 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | |||||| ||||| || | |||| ||||||||||| ||||||||| | || Sbjct 1648 ACGAAGGCGCAATACCAAGTGCAATGTTGATTCTTTTTGAATATTGTAGTCGGAAAGTGT 1589 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| | || || || | | | || | ||| || |||||||| || || || Sbjct 1588 GCGACCATCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATTCC 1529 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 |||||| || ||| || ||| | | ||| | ||| || | || || || || | Sbjct 1528 TTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAGGGTTCGACCTCAAG 1469 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | || ||||| ||||| ||||| | ||| ||||||||| Sbjct 1468 AGTGATGGTCTTACCCGTCAGGGTTTTGACGAATATCTGCATG 1426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475434506523600