Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq64788 113 4e-20
seq53560 96.9 3e-15
seq125840 87.8 1e-12
seq43813 82.4 6e-11
>seq64788
Length=4825
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||| ||||| || |||||||||||||| ||||| ||| |||| || || |
Sbjct 2043 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCTTCC 1984
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| || ||| | || ||| |||||| ||||| ||||| | || ||||||
Sbjct 1983 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 1924
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | |||| || || |||||||| ||||| || || ||||||||
Sbjct 1923 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 1864
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471
|||||||||||||||||| | ||||| |||||
Sbjct 1863 ATACAAAAAGAATCTACATTGCATTTGGTATT 1832
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316
||||||||||| || || || ||||| |||||||||||||| ||| | || |||||
Sbjct 2274 AAAATGCAAATCTTCGTGAAGACATTAACTGGCAAGACCATCACCTTAGAGGTCGAACCA 2215
Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376
||| || ||| | || || |||||| || || || ||| | ||| |||
Sbjct 2214 TCTGATACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCCCCAGAT 2155
Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436
|||||| | || |||| ||| || |||||| | ||||| ||| || |||||||
Sbjct 2154 CAACAACGTCTAATTTTTGCCGGTAAACAACTTGAAGACGGACGCACTTTGTCCGATTAC 2095
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGT 106468
||||| |||||||||||||| || ||||| ||
Sbjct 2094 AACATTCAAAAAGAATCTACTCTTCATTTGGT 2063
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| ||||| ||||| || ||||| || || || |||||| | ||| ||||| |
Sbjct 1587 ATGCAGATTTTCGTTAAGACCTTGACAGGAAAAACAATTACCTTAGAAGTTGAACCATCC 1528
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | || || |||||| || |||||||| | ||| ||||||
Sbjct 1527 GACACTATTGAAAATGTAAAGGCCAAAATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 1468
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||| | | || | || || |||||||| |||||| || || ||||||||||
Sbjct 1467 CAACGTTTAATCTTCGCTGGTAAACAATTGGAAGATGGACGTACATTGTCCGATTACAAC 1408
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471
|| ||||| || ||||| || ||||| || ||
Sbjct 1407 ATTCAAAAGGAGTCTACCCTTCATTTGGTCTT 1376
>seq53560
Length=2468
Score = 96.9 bits (106), Expect = 3e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 99892 ACGTTTAGAAACTTTTGTGGATTGGCCGCTCAGTTTGAAACAAAAACCAGAGCAATTGGC 99951
||||||| |||| ||||| || ||||| | ||| |||||||||| || | | |||||||
Sbjct 1023 ACGTTTACAAACATTTGTCGACTGGCCACGAAGTATGAAACAAAAGCCTGCGGAATTGGC 964
Query 99952 CGAAGCCGGTTTTTATTACACCGGCAAAGGTGACAAAGTTAAATGTTTTCATTGCGACGG 100011
||| || ||||| ||||| | || ||||||| || |||||||| || | ||
Sbjct 963 CGAGGCTGGTTTCTATTATATGGGTGTTGGTGACAGTGTAAAATGTTTCAGCTGTCAGGG 904
Query 100012 CGGCCTCAAAGACTGGGA 100029
||| || |||||||||||
Sbjct 903 CGGTCTTAAAGACTGGGA 886
>seq125840
Length=3442
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 106254 TTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAA 106313
||| | ||||| || || || ||||| || ||||| |||||||||||| ||||| ||
Sbjct 532 TTATAGATGCAGATCTTCGTCAAAACTTTAACTGGTAAGACCATTACCTTGGAAGTCGAG 591
Query 106314 CCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTT 106373
|| ||| | ||| | || || ||||| ||||||||||| | |||
Sbjct 592 CCTTACGACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCA 651
Query 106374 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGAT 106433
||||||||| | | || | || || |||||||| |||||| | || || |||
Sbjct 652 GATCAACAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGAC 711
Query 106434 TACAACATACAAAAAGAATCTACACTACATTTAGTA 106469
||||| || ||||| ||||| || ||||||| |||
Sbjct 712 TACAATATCCAAAAGGAATCCACCTTACATTTGGTA 747
>seq43813
Length=3862
Score = 82.4 bits (90), Expect = 6e-11
Identities = 101/138 (73%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 99892 ACGTTTAGAAACTTTTGTGGATTGGCCGCTCAGTTTGAAACAAAAACCAGAGCAATTGGC 99951
||||||| |||| |||| || ||||| | ||| |||||||||| |||||| || ||||
Sbjct 1301 ACGTTTACAAACATTTGCCGACTGGCCACGAAGTATGAAACAAAAGCCAGAGGAACTGGC 1242
Query 99952 CGAAGCCGGTTTTTATTACACCGGCAAAGGTGACAAAGTTAAATGTTTTCATTGCGACGG 100011
||| || ||||| ||||| | ||| || |||| || |||||| || ||
Sbjct 1241 CGAGGCTGGTTTCTATTATAGGGGCGTTGGGGACAGTGTACTATGTTTCAGCTGTTTGGG 1182
Query 100012 CGGCCTCAAAGACTGGGA 100029
|| ||||||||||||||
Sbjct 1181 TGGTCTCAAAGACTGGGA 1164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 401361131046080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |