Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq41982 136 4e-27 seq177482 132 5e-26 seq125840 127 2e-24 seq64788 114 1e-20 >seq41982 Length=5201 Score = 136 bits (150), Expect = 4e-27 Identities = 451/695 (65%), Gaps = 21/695 (3%) Strand=Plus/Plus Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 ||||| || ||| |||| ||||| |||| || |||||| ||||||| || || || Sbjct 2276 GCCATAATTGAAGCTCAAGTAGAAACAGGTACTCCCTACATGTTGTACAAGGATGCCTGT 2335 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 || || || || || || | ||||| ||| ||||| || |||| | ||| Sbjct 2336 AATCGTAAGAGTAACCAGCAAAATATTGGCACTATTAAGTGCAGTAACTTGTGTACGGAA 2395 Query 8353 ATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTA 8412 |||||| |||| ||| ||||| || | ||||| || ||| | || || | | Sbjct 2396 ATTGTAGAGTATTCCGCACCCGATGAGATAGCCGTGTGTAATTTGGCCTCAATAGCCCTT 2455 Query 8413 AACGCGTTCGTTGATCGACGCTC--AAACACTTACGACTTTGAACAATTGAAAAACGCCG 8470 || ||| || ||||| ||| || | ||||||| | |||| ||||| | Sbjct 2456 AATATGTTTGT-----GACGCCTGAAAAAACATTCGACTTTAAGAAATTAAAAAATGTTA 2510 Query 8471 TGCAAGTGACGGTACGCAATTTAGATCGCA------TCATTGATGTCAATTTTTATCCCT 8524 |||| | ||| ||| | ||| || |||| || | || |||||||| Sbjct 2511 CTAAAGTCAT--TAC-CAA---AAATCTCAACAAAATCATAGACATTAACTTTTATCCTC 2564 Query 8525 TGGAAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTC 8584 || || || | ||| || | || || | || ||||| | || ||||| |||| Sbjct 2565 TGCCGGAGGCCAGGAAATCTAATCTACGTCATCGTCCTATTGGCATAGGTGTGCAGGGTC 2624 Query 8585 TGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCA 8644 | |||||| | || | |||| |||||||||||||| || | ||| || | | Sbjct 2625 TTGCCGACACATTGATTTTAATGCGTTTCCCCTACGAAAGCGAAAAGGCGGCTTTGTTAA 2684 Query 8645 ACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCC 8704 | | |||| ||||| | ||||| |||||||| ||||| || ||| || ||| || Sbjct 2685 ATCAACAAATTTTCGAAACTATTTATTATGGCGCATTGGAAGCTAGTTGTGAA-TTGTCC 2743 Query 8705 GAGAA-TTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAA 8763 || || | || | || ||| | || | ||| |||| | || || ||| | ||| Sbjct 2744 GAAAAGCTAGGTCCTTATGAAACTTATCCCGGCTGCCCGGTAAGTAAGGGCATACTACAA 2803 Query 8764 TACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAA 8823 ||||| ||||||||| || || ||| ||||||||| |||| || |||||| ||| Sbjct 2804 TACGATATGTGGAATAAAACTCCTACCGATTTGTGGAACTGGACAGAGTTGAAAGAGAAA 2863 Query 8824 ATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACT 8883 || || ||| | || ||||| || | |||| |||||||| ||| | || Sbjct 2864 ATCAAACAGCATGGTGTACGAAATTCTTTGCTATTGGCCCCTATGCCCACTGCCTCTACC 2923 Query 8884 GCTCAAATAATGGGAAACAACGAATCCTTTGAGCC 8918 || ||||| |||| || || ||||| |||||||| Sbjct 2924 GCACAAATCTTGGGCAATAATGAATCATTTGAGCC 2958 >seq177482 Length=2829 Score = 132 bits (146), Expect = 5e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || | ||| | || ||||| |||||||| ||||||||| || ||| || Sbjct 1644 AGGCGCAATACCAAGTGCAATGTTGATTCTTTTTGAATATTGTAGTCGGAAAGTGTGCGA 1585 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || || || |||||||||||||| |||||||| || || || |||||| Sbjct 1584 CCATCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATTCCTTCT 1525 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || |||||| || | ||||| || | ||| || || ||||| Sbjct 1524 TTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAGGGTTCGACCTCAAGAGTG 1465 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || | ||||| ||||| || ||||| Sbjct 1464 ATGGTCTTACCCGTCAGGGTTTTGACGAATATCTGCAT 1427 >seq125840 Length=3442 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 |||| |||||||||||||| || ||||||||| | |||| || || || | ||| Sbjct 740 TGTAAGGTGGATTCCTTTTGGATATTGTAGTCGGACAAGGTGCGACCATCTTCCAATTGT 681 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || || |||||||| || ||||| || || || |||||||| ||||| ||||| Sbjct 680 TTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTGGATTTTA 621 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || | |||||| | | || || || | |||||||| ||||| ||| Sbjct 620 GCCTTGACATTTTCAATGGTGTCGTAAGGCTCGACTTCCAAGGTAATGGTCTTACCAGTT 561 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 |||||||| ||||| || ||||| Sbjct 560 AAAGTTTTGACGAAGATCTGCAT 538 >seq64788 Length=4825 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || ||||| |||||||||||||| ||| | ||| | ||| || || ||| Sbjct 2069 TGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGACAAAGTGCGTCCGTCTTCAAGTTGT 2128 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || |||||||| | ||| || ||||| || || ||||| || || ||||||||||| Sbjct 2129 TTACCGGCAAAAATTAGACGTTGTTGATCTGGGGGAATGCCCTCCTTATCTTGAATTTTA 2188 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || | || || || | ||| || || | || ||||| || || ||| Sbjct 2189 GCCTTGACATTTTCAATAGTATCAGATGGTTCGACCTCTAAGGTGATGGTCTTGCCAGTT 2248 Query 134691 AAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||| ||||||||||| Sbjct 2249 AATGTCTTCACGAAGATTTGCATTTT 2274 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| ||||| || | ||| || ||||| ||||||||||| ||||| ||| Sbjct 165 CCACCACGGAGACGCAATACCAAGTGGAGAGTGGACTCCTTTTGAATATTGTAATCGGAC 224 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | ||| || || || || |||||||| ||||| || || || Sbjct 225 AAAGTACGGCCATCTTCCAACTGCTTACCGGCGAAGATCAAACGTTGCTGGTCTGGGGGA 284 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || |||||||| ||| || || | ||||| || | ||| || Sbjct 285 ATACCTTCCTTATCCTGAATTTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACT 344 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||| || || || || ||||||||||| ||||| Sbjct 345 TCCAAGGTGATGGTTTTGCCAGTCAAGGTCTTAACGAAAATCTGCAT 391 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||||||| | || || |||||||||||||| || |||||||| Sbjct 1133 CCACCGCGGAGACGCAACACCAAATGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGAG 1192 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || || | ||| || || || || |||||||| || || || || || Sbjct 1193 AGGGTGCGACCATCCTCCAACTGCTTACCGGCGAAGATCAAACGTTGTTGGTCTGGAGGG 1252 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||||| || | || || || | ||| || Sbjct 1253 ATACCTTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTATCTGATGGTTCTACC 1312 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||| || || || ||||| |||||||| ||||| Sbjct 1313 TCCAAGGTGATGGTTTTTCCAGTCAACGTTTTCACGAAAATCTGCAT 1359 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || || || | ||| || || || || ||||| |||||||| ||| Sbjct 1589 CCACCGCGGAGACGTAAGACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAATCGGAC 1648 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | ||||| || || ||||| |||||||| ||||| || || Sbjct 1649 AATGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATTAAACGCTGTTGATCTGGGGGA 1708 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| ||||| ||| || || | || || || | ||| || Sbjct 1709 ATACCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCTATGGTATCCGATGGTTCGACC 1768 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 1769 TCTAATGTAATTGTTTTTCCCGTTAATGTTTTAACGAATATTTGCAT 1815 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || || || | || || || || ||||||||||||||||| ||| Sbjct 1361 CCACCGCGGAGACGTAAGACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAATCGGAC 1420 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | ||||| || || || || ||||| || ||||| || || Sbjct 1421 AATGTACGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGGGGA 1480 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||||||||| || || || | |||||||| | ||| || Sbjct 1481 ATACCTTCTTTATCTTGAATTTTGGCCTTTACATTTTCAATAGTGTCGGATGGTTCAACT 1540 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| ||||| || || || || ||||||||||| ||||| Sbjct 1541 TCTAAGGTAATTGTTTTTCCTGTCAAGGTCTTAACGAAAATCTGCAT 1587 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || | ||| || || || ||||||||||| |||||||| || || |||||||| || Sbjct 9 TCTTCCAACTGCTTACCAGCGAAAATCAAACGTTGCTGATCCGGGGGAATGCCTTCCTTA 68 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAAT 134677 || || ||||| |||| || | |||| || ||||| | || || || | || || Sbjct 69 TCCTGGATTTTAGCCTTGA-CGTTTTCAATGGTATCGGAAGGCTCTACTTCCAATGTGAT 127 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || |||||||||||||| |||||||| Sbjct 128 AGTTTTGCCAGTCAAAGTTTTAACGAAGATTTGCAT 163 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 || ||||| ||||| || ||||| || | ||| | || | ||| || | ||||| || Sbjct 1847 GTAGATTCTTTTTGTATATTGTAATCAGACAATG-TGCGCCCGTCTTCCAATTGTTTACC 1905 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 || ||||||||||| || ||||| || || || ||||| || ||||||||||| ||| Sbjct 1906 GGCGAAAATCAAACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTTAGCTTT 1965 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 || || | || ||||| | || || || | || |||||||| || || || || Sbjct 1966 AACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAGGTGATGGTTTTGCCAGTCAATGT 2025 Query 134696 TTTAACGAAAATTTGCAT 134713 || || || |||||||| Sbjct 2026 CTTGACAAAGATTTGCAT 2043 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||||||| | || || |||||||||||||| || |||||||| Sbjct 858 CCACCGCGGAGACGCAACACCAAATGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGAG 917 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || || | ||| || || || || |||||||| || || || || || Sbjct 918 AGGGTGCGACCATCCTCCAACTGCTTACCGGCGAAGATCAAACGTTGTTGGTCTGGAGGG 977 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 || ||||| || ||||| || || Sbjct 978 ATACCTTCCTTATCTTGGATCTT 1000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504150634525200