Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq41982 556 2e-153 seq91934 331 1e-85 seq39385 98.7 1e-15 >seq41982 Length=5201 Score = 556 bits (616), Expect = 2e-153 Identities = 1488/2248 (66%), Gaps = 60/2248 (3%) Strand=Plus/Minus Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422 ||||||||| ||||| || || | | ||| |||||||| | | ||| ||||| | Sbjct 3365 CCTTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGC 3306 Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482 |||| || | ||| |||| | |||||||| || || | ||| || | | Sbjct 3305 CGGTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGG 3246 Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542 | || || | ||| ||||| | ||| |||||||||||||||||||| || | ||| || | Sbjct 3245 GTTCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTG 3186 Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAA---------AATCT 68593 |||||| ||| | |||| | ||| ||||||| |||||| | ||| | Sbjct 3185 CCATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATAT 3126 Query 68594 GTTTG---ATATCATCTGGAAGGCTCGTATTTTGAATGGATCCACCATCGGATATAATTA 68650 |||| || |||||| | |||| |||| || || | || ||| |||||| Sbjct 3125 CTTTGGGAATTTCATCT--ATGGCTTGTATA-------GAGCCGCGATTGGAAATAATTC 3075 Query 68651 TATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGAT 68710 | || || || || |||| ||| | | | || |||||| || | || | ||| ||| Sbjct 3074 TGTTTTTCATTTCGTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGAT 3015 Query 68711 TAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTT 68770 | || || | ||||| || |||| ||| | | || |||||||| |||||| || | Sbjct 3014 TGACAATATTGAATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCT 2955 Query 68771 CCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCA 68830 | | ||||||||||| |||| ||||| || || || ||||| |||||||| |||| | Sbjct 2954 CAAATGATTCATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATA 2895 Query 68831 ATAAACTATTTCTAAGACCATG-TGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAA 68889 ||| ||||| | |||||| |||| ||||||| ||||| | | | |||| | ||| Sbjct 2894 GCAAAGAATTTCGTACACCATGCTGTT-TGATTTTCTCTTTCAACTCTGTCCAGTTCCAC 2836 Query 68890 AGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT 68949 | ||| | || |||||| | |||||||||||| || || |||||| | | Sbjct 2835 AAATCGGTAGGAGTTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAG 2776 Query 68950 CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009 || ||| ||||||||||| ||| || ||| | | ||||||||| || || ||||| Sbjct 2775 CCGGGATAAGTTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCG 2716 Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069 || |||||||| ||||||||||| | | ||| | || | | || ||| | Sbjct 2715 CCATAATAAATAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAG 2656 Query 69070 GGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTA 69129 || || | | | ||| |||| || || | ||||| || || || || ||||| | | Sbjct 2655 GGGAAACGCATTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGA 2596 Query 69130 TGTCTCTTATTTGAACTTTCA--GCTTCTGGAATAGGATAATAATTAATATCTATAATTT 69187 || | ||| || |||| || || || | ||||||| | ||||| ||||| |||| Sbjct 2595 TGACGTAGATTAGA--TTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTT 2538 Query 69188 TATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTC 69247 | || |||||| | | |||||| || | |||| ||| ||| || ||| | Sbjct 2537 TGTTGAGATTTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGTTT 2478 Query 69248 CATCTA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCAT 69304 || | ||||||||||| || |||| || || | |||||| || |||| ||||| Sbjct 2477 TTTCAGGCGTCACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCAT 2418 Query 69305 TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGAT 69364 | | ||| | || || || ||||| | ||||| || || ||||| || | || Sbjct 2417 CGGGTGCGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCAATAT 2358 Query 69365 TTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTT 69424 ||||||| |||||||| |||||||| |||||||| | || | |||||||| |||| Sbjct 2357 TTTGCTGGTTACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTT 2298 Query 69425 CAATCTGAGATTCGATAATAGATTTCCAAACGACCCT-AGCATTTA--TTACGGTCTTGT 69481 | | |||| ||| || || | ||||| || ||| || || | |||||| ||| Sbjct 2297 CTACTTGAGCTTCAATTATGGCAAACCAAA-GAGCCTGGGCCTTGACGGTACGGT-TTGC 2240 Query 69482 AACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCAT 69541 || | || |||||||| | ||||| | ||||||||| | |||||||| || | Sbjct 2239 TTTGCCT-TCATTTTCATACTTGGTATACAATTCTTCGAATTCCGCACCCCAAACTTCCT 2181 Query 69542 CCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTT 69601 || |||||||||| | |||||||| || ||||| | ||| || | |||| || Sbjct 2180 GCAGACCAGGACATTTGTGGGGACACATTAACGACCAATCTCCATTTTCTTCTACTCTTT 2121 Query 69602 TCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCA 69660 ||||||| | |||||| ||||| || || ||| || |||||||| | ||| | ||||| Sbjct 2120 TCATAAACAAATCGGGTATCCACAGGGC-ATAGAATAGATCTCTAGCTCTGTGCTCTTCC 2062 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || || |||||||| || | ||| | ||| || | |||||| |||||||| || || | | Sbjct 2061 TTGCCGGTATTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAA 2002 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || || || | |||| || ||||| || || ||||||| || | |||| || Sbjct 2001 TAAATGGCAAATGCTCCTGGACGTTTGCCGCCGCCTTGATCTACATAGCGGGCAACATTG 1942 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 ||| | || || ||||| || | | ||||| || | || || || ||| || || Sbjct 1941 TTAAACACCCTAAGCATGGGCACCAGTCCATTTGAGGTGCCGTTAGTACCATCGATGGAA 1882 Query 69841 CTTCCTCTTGCGCGAATAT-TACTAATAGAT-AGACCTATTCCTCCTGCCATTTTAGAGA 69898 | || |||| || ||| | | | | | || || || || || ||| || | Sbjct 1881 GTGCC-CTTG-GCCCTTATGCAGTGCACGTTAATGCCAATACCACCAGCAGATTTGGAAA 1824 Query 69899 TTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAA 69958 | | || || ||| || || | | ||||| || || |||| | | |||| | | Sbjct 1823 TCATGGCGCATTGTTCCACTGACTTGAAAATACCTTCAATAGAATCAGCCACCATGGTCA 1764 Query 69959 GAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATG 70018 ||| || || |||| ||| | | || | ||| ||| || || || || | Sbjct 1763 AAAGGAAGCACGATGACAATTGTGGTCGCGGGGTAGCAGCAGCAAACAAAGTGGGCGAGG 1704 Query 70019 CGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCC 70078 | || || || | ||||| | || || || ||||| || || || ||||| || Sbjct 1703 CATGTGTAAAATAACGCTCAGACAACAAGTTATAAGTTTCGATGGCCGAATCTATGTCAT 1644 Query 70079 ACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTAT 70138 ||| || ||||| || || | ||| ||||||||||| |||| ||| || | ||| Sbjct 1643 CTCCATGTATACCTATAGCTACTCTCATTAACATATGCTGTGGTCTTTCAACAATCTTAC 1584 Query 70139 TATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAA 70198 ||| ||||||| || || ||| | ||||| || || || |||||||| ||||| || Sbjct 1583 CATTCATTTTCAGCAAATAGGATCTCTCCAGTGTCTTGAATCCAAAATAATTGTAGCCAA 1524 Query 70199 AGTCTCTTTCGTAAATAATAACAGAATTTA---GTTTATCCTTATATTTGGTAACTATAT 70255 |||| | || |||||||| ||||| | ||| | || | | || || | Sbjct 1523 AGTCACGATCATAAATAATGGACGAATTCAAACGTTCTGCATTCT-TCTG--CACCA--- 1470 Query 70256 CCATAACAGTAGGT-----GAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATA 70310 ||| ||| | | || || || || || |||||| | | |||||||| Sbjct 1469 -CATTGTAGT-GATACTCCGAAATCATGGGCGAAGTTTTACCCGTCTCTTTGTTAACATA 1412 Query 70311 GTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGA 70370 | | | ||| || || || ||||| |||||| ||||||||||| ||||| || Sbjct 1411 ATGATACAGATCACTTATAACCTCTGAAAATACTTTTTTCGTTTCCTTGTGCAAATTGGA 1352 Query 70371 TATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGC 70430 | ||| || | || || | || ||||| ||| ||| | ||| || | ||||| || Sbjct 1351 GACGGCAATACGAGCCGCCAATATGGCATAATCACCATGATTTGTTGTCAATGTAGCAGC 1292 Query 70431 TATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATAT-AGCCCTTGAA 70489 | | || || || || | || || ||| ||||||||| || ||| |||| ||| | Sbjct 1291 TGTCTCGGCTGCCAAATTGTCCAACTCTTGAGTTGTAACACCACAGTATAAGCCATTG-A 1233 Query 70490 TAACTTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATT 70549 ||||||||| | || | || || | || || | || | ||||| || | | Sbjct 1232 TAACTTTCAGTGTAATGGCCACTGGGTCAACAAAATCCATATTTAATCCATAGCAAAGCT 1173 Query 70550 TTCTAATACGAGATGTAATTTTATCAAA 70577 || ||||||||||||||||||||| || Sbjct 1172 TTTGAATACGAGATGTAATTTTATCGAA 1145 >seq91934 Length=4437 Score = 331 bits (366), Expect = 1e-85 Identities = 499/708 (70%), Gaps = 5/708 (1%) Strand=Plus/Minus Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504 ||| | ||| || |||||||| || ||| ||||| || ||||||||| || || | Sbjct 3571 CAAACGATCAGCTACAAATTCAATATATTCCGACATCAATTTACAATTCATGCCAATCAA 3512 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 || || || | ||| || |||| ||||||| ||| || | ||| || || |||||||| Sbjct 3511 ATTGACGGGCAAAGCTTCGGTTAAGAACTCTTGTTCAATTTTTACAGCTTCCGTTATTAT 3452 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 |||| | |||| || || | || | |||||||||||||||||| || || Sbjct 3451 TTCGGTTATTCTCTCACGGCTGGGACGTTGTATTAAATGTTTAAACATTAACACAGCAAA 3392 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 |||||||||| ||||| || | | ||| || || || || ||||| || |||||||| Sbjct 3391 ATCACAATGTAAACCCTCGTCACGAGAAATCAACTCATTGGAGAATGTAAGGCCAGGCAT 3332 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 |||||||| || || ||||||||||| | ||||||| ||| ||||| ||||| || Sbjct 3331 AAGACCACGTTTCTTTAGCCAAAATATCGAAGCAAAACTGCCACTGAAGAAAATGCCCTC 3272 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATG----TATCCACT 39800 || || |||||||||| || | || || || ||| ||| || ||||| Sbjct 3271 CACAGCGGCAAATGCAATAATGCGTTCACC-AAAATTGGCCGATTTTGAGCCAATCCAAG 3213 Query 39801 TCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAT 39860 | ||||||||| || || ||| ||| ||||| ||||| || ||||||||||||| Sbjct 3212 ACATTGCCCAATCGGCCTTGCGCTTAACAGCTGGCATCGTTTCAATGGCATTAAAGAGAT 3153 Query 39861 AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920 ||| || || | |||||||| || | || || || | |||||||||||| || | Sbjct 3152 AATCGCGTTGTTCGCGATCTTTAATGTAGCTGTCGATCAAAATACTATACATTTCAGAGT 3093 Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980 | | ||||| || || || || || || || ||||| | ||| || |||| |||||||| Sbjct 3092 GTACATTTTCCATGGCAATTTGGAAACCATAGAAACAGCGTGCCTCTGTAACTTGTACCT 3033 Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040 || |||| | ||| | | ||||||||| || || ||||| ||| ||||| || | Sbjct 3032 CTTGGGAAAAACGTTCAACAAGATTTTCATTGACAATACCATCGGAAGCAGCAAAGAAGG 2973 Query 40041 CCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATAT 40100 ||| |||||| ||||| || |||| | || | ||| | |||||| ||| Sbjct 2972 CCAGAACATGTGAGATAAAGTAACGCTCATTGTCGGTGAGTTTTTCCCAGTCCGAATTAT 2913 Query 40101 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 |||| || | |||||||||||| | |||||||| || || || |||| Sbjct 2912 CTTTAGAGAGATCTACTTCTTCTACAGTCCAAAAAGATGCTTCAGCCT 2865 >seq39385 Length=6125 Score = 98.7 bits (108), Expect = 1e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 34709 TCCTTGACCTGTGTTAGAGAACGCCAATCCATATTAGCACTTCCTAGATAAATGTGTGCA 34768 || ||||| || |||| ||| | ||| |||||||| ||||| || |||||||||||| | Sbjct 2567 TCTTTGACTTGGGTTAAAGATCTCCAGTCCATATTTGCACTGCCCAGATAAATGTGTTTA 2626 Query 34769 TTATCCGATATCCAAAATTTTGTATGAAGAACACCGCCT 34807 || ||||| |||||||||||||| || | |||||| ||| Sbjct 2627 TTGTCCGAAATCCAAAATTTTGTGTGTAAAACACCTCCT 2665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 685212908036400