Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq41982 370 9e-98 seq64788 131 1e-25 seq177482 114 1e-20 seq125840 104 2e-17 >seq41982 Length=5201 Score = 370 bits (410), Expect = 9e-98 Identities = 1117/1705 (66%), Gaps = 65/1705 (4%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || || || ||||| || ||||| | || || || || | ||||||||||||||| Sbjct 3363 TTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCCG 3304 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGGTAATTGGGT 130525 || || | || ||| |||| || || | || | | ||| |||||| Sbjct 3303 GTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGGT 3244 Query 130526 TGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCC 130585 | ||||| ||| |||| ||| || |||||| || |||||||| | || || ||| Sbjct 3243 TCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGCC 3184 Query 130586 ATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGT 130645 || | | |||| ||| ||||||||| | ||||| |||||||| | ||| | | Sbjct 3183 ATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATCT 3124 Query 130646 TTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATA 130705 ||||| || | || | ||| | ||| |||| |||||| ||| ||| Sbjct 3123 TTGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTCAT- 3065 Query 130706 CTTTTATCGTACAATCCAAGCTGTACA---AGATCTTTTACCAAATGATTATTAATGATT 130762 || || | | || | || || | |||||||| |||||||| ||| | || Sbjct 3064 --TTCGTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATA 3007 Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822 | || || || | || || ||||| ||||| ||| || | || ||||| ||| Sbjct 3006 TTGAATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGAT 2947 Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882 || || ||||| || |||||||| |||| || |||||||| |||| || | |||| Sbjct 2946 TCATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAA 2887 Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTA 130942 || || | ||| ||| ||||||| ||||| || ||| | ||| | | |||| Sbjct 2886 TTTCGTACACCATGCTGTTTGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTA 2827 Query 130943 GGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACT---------GGCGGGA 130993 || | || ||||||||||| ||||||||||||| ||||| | ||||| Sbjct 2826 GGAGTT---TTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGA 2770 Query 130994 CTGGATTCG-AACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAA 131052 | ||| || || | ||| || |||| | || || ||||||||||| Sbjct 2769 TAAGTTTCATAAGGA--CCTAGCTT--TTCG------GACAATTCACAACTAGCTTCCAA 2720 Query 131053 AGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTC 131112 || || |||||||| |||||| |||||||| |||||| ||| | | ||| || Sbjct 2719 TGCGCCATAATAAATAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTC 2660 Query 131113 GTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGG 131172 ||| || || ||||||||| || | ||| || |||||||| | || | ||| | || Sbjct 2659 GTAGGGGAAACGCATTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGG 2600 Query 131173 TCTATGTTTTAAATTACATTTACGCGAACATTCGGTGG--GATAAAGGTTAATGTCAATT 131230 | ||| || |||| |||| | | | | ||| | |||||| ||||||||| || Sbjct 2599 ACGATGACGTAGATTAGATTTCCTGG--CCTCCGGCAGAGGATAAAAGTTAATGTCTATG 2542 Query 131231 ATTTTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAAC 131290 |||||||| | ||| | | || || || |||| ||||| | || || || Sbjct 2541 ATTTTGTTGAGATTTTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAAT 2482 Query 131291 GTGCCAGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCC 131350 || |||| | | ||||| ||| | |||||| |||| |||||| || || Sbjct 2481 GTTT---TTTCAGGCGTCACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCT 2425 Query 131351 GTTTCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTG 131410 | || || || |||||| |||||||| | ||||| ||||||| ||| || ||| Sbjct 2424 ATCTCATCGGGTGCGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTG 2365 Query 131411 CCCAAATTTTGTTGATTGCTTTTAGCATTCACATGG-TCCTTGTACATCATGTAGGGCGT 131469 || | |||||| || || || ||| ||| ||| | |||||||||| ||||||||| || Sbjct 2364 CCAATATTTTGCTGGTTACTCTTACGATT-ACAGGCATCCTTGTACAACATGTAGGGAGT 2306 Query 131470 GCCCGTTTCGACTTGAGTTTCAATAATGT--ATCGAAAGAGTTTTCGAGCAGACAATTGA 131527 || ||||| ||||||| |||||| ||| | | |||||| | | ||| | Sbjct 2305 ACCTGTTTCTACTTGAGCTTCAATTATGGCAAACCAAAGAGCCTGGGCCTTGAC----GG 2250 Query 131528 TA---TTTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGG--- 131581 || |||| ||| | | |||| | || || ||||| ||| || || | Sbjct 2249 TACGGTTTGCTTTGCCTTCATTTT-CATACTTGGTATACAATTCTTCGAA-TTCCGCACC 2192 Query 131582 CCAAACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTC 131641 |||||| ||| || | ||||||| | ||||||||||| |||||| | || || Sbjct 2191 CCAAACTTCCTG--CAGACCAGGACATTTGTGGGGACACATTAACGACCAATCTCCATTT 2134 Query 131642 TGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCT 131701 | ||| |||| |||||||||||||| || | ||| | || || || |||||||||||| Sbjct 2133 TCTTCTACTCTTTTCATAAACAAATCGGGTATCCACAGGGCATAGAATAGATCTCTAGCT 2074 Query 131702 TTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGC 131761 | | |||||| | || || |||| || |||| ||||| || ||||| || | |||| Sbjct 2073 CTGTGCTCTTCCTTGCCGGTATTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGC 2014 Query 131762 CAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGA 131818 || || |||||||| | || | ||| ||| || || |||||||||| |||| Sbjct 2013 CAAGGCTCCAAATAAATGGCAAATGCTCCTGGACGTTTGCCGCCGCCTTGATCTACATAG 1954 Query 131819 CGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTG 131878 || | | ||||| | || | | ||||||| ||| || || | | | || || || Sbjct 1953 CGGGCAACATTGTTAAACACCCTAAGCATGGGCACCAGTCCATTTGAGGTGCCGTTAGTA 1894 Query 131879 CTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCG 131938 | | ||| | |||| ||||| || || ||| ||||| | |||||||| || | Sbjct 1893 CCATCGATGGAAGTGCCCTTGGCCCTTATGCAGTGCACGTTAATGCCAATACCACCAGCA 1834 Query 131939 TATTTAGAGATTAGTGCGCATTTGGTTAGAGTG--TTATAGATACCTTCCACGCTGTCCG 131996 |||| || || | ||||||| ||| | || || | |||||||| | || | Sbjct 1833 GATTTGGAAATCATGGCGCATT--GTTCCACTGACTTGAAAATACCTTCAATAGAATCAG 1776 Query 131997 CGGCAATGTCGACTAAA--AAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCTGAAAA 132054 | | ||| | | ||| ||||| || ||||| ||| | | || | || | ||| Sbjct 1775 CCACCATG--GTCAAAAGGAAGCACGATGACAATTGTGGTCGCGGGGTAGCAGCAGCAAA 1718 Query 132055 CAATGTGGGGCTGGCGTGTGTAAAA 132079 ||| ||||| ||| ||||||||| Sbjct 1717 CAAAGTGGGCGAGGCATGTGTAAAA 1693 >seq64788 Length=4825 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || ||||| || ||||||||||| || ||||| |||||||| |||||||| || Sbjct 1815 TGCCACCACGCAAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTGTAATCAG 1874 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || ||||| ||||||| | |||||||||||| |||| | ||| |||||||| || | Sbjct 1875 ACAATGTGCGCCCGTCTTCCAATTGTTTACCGGCGAAAATCAAACGTTGTTGATCTGGAG 1934 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || || || ||| | |||| | ||| || | | |||| Sbjct 1935 GGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAA 1994 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || | || || | |||||| |||| || || ||||||||||||||| Sbjct 1995 CCTCCAAGGTGATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCATA 2044 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | ||||| ||||||||||| ||||| ||| || |||| ||||||| Sbjct 2063 ACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGACAAAGTGCGTCCGTCTTCA 2122 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||||||||| |||| ||||| |||||||| || || | ||||| ||||| Sbjct 2123 AGTTGTTTACCGGCAAAAATTAGACGTTGTTGATCTGGGGGAATGCCCTCCTTATCTTGA 2182 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || || | |||| | ||| || | | ||| || |||| || || | ||| Sbjct 2183 ATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCGACCTCTAAGGTGATGGTCTTG 2242 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || | || ||||| ||||||||||| Sbjct 2243 CCAGTTAATGTCTTCACGAAGATTTGCAT 2271 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || || |||||||| | ||||| || |||||||| ||||| ||| | Sbjct 1361 CCACCGCGGAGACGTAAGACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAATCGGAC 1420 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| | |||||||| ||| | || | ||| |||||||| || || Sbjct 1421 AATGTACGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGGGGA 1480 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| || ||| || | |||| | |||||| | | ||||||| Sbjct 1481 ATACCTTCTTTATCTTGAATTTTGGCCTTTACATTTTCAATAGTGTCGGATGGTTCAACT 1540 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| || || | ||| || |||| || || || || || |||||| Sbjct 1541 TCTAAGGTAATTGTTTTTCCTGTCAAGGTCTTAACGAAAATCTGCATA 1588 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || || ||||| || | || || |||||||| || ||||| ||| | Sbjct 1589 CCACCGCGGAGACGTAAGACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAATCGGAC 1648 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| | |||||||| ||| |||| | |||||||||||| || || Sbjct 1649 AATGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATTAAACGCTGTTGATCTGGGGGA 1708 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| ||||| || ||| || ||| | |||||| || || | | ||| || Sbjct 1709 ATACCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCTATGGTATCCGATGGTTCGACC 1768 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| || || | ||| ||||| | ||||| || || |||||||| Sbjct 1769 TCTAATGTAATTGTTTTTCCCGTTAATGTTTTAACGAATATTTGCAT 1815 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| |||||||| | || || || ||||| ||||||||||| Sbjct 1133 CCACCGCGGAGACGCAACACCAAATGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGAG 1192 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || || | ||| ||||||||| | || | ||| ||||| || || || Sbjct 1193 AGGGTGCGACCATCCTCCAACTGCTTACCGGCGAAGATCAAACGTTGTTGGTCTGGAGGG 1252 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || ||||| |||||| || | |||| | || |||| | ||| || Sbjct 1253 ATACCTTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTATCTGATGGTTCTACC 1312 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | ||| || |||| |||||||| || || |||||| Sbjct 1313 TCCAAGGTGATGGTTTTTCCAGTCAACGTTTTCACGAAAATCTGCATA 1360 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || || | ||||||||||| || | || || || |||||||||||||| ||| Sbjct 163 TGCCACCACGGAGACGCAATACCAAGTGGAGAGTGGACTCCTTTTGAATATTGTAATCGG 222 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || | ||||| | ||| ||||||||| | || | ||| || || || || | Sbjct 223 ACAAAGTACGGCCATCTTCCAACTGCTTACCGGCGAAGATCAAACGTTGCTGGTCTGGGG 282 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||| || ||||| || || ||| | |||| | ||||| | | ||||| Sbjct 283 GAATACCTTCCTTATCCTGAATTTTAGCTTTAACATTTTCAATGGTGTCAGATGGTTCAA 342 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| | || || | |||||| |||| || || || || || |||||| Sbjct 343 CTTCCAAGGTGATGGTTTTGCCAGTCAAGGTCTTAACGAAAATCTGCATA 392 >seq177482 Length=2829 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||||||||| || || || || ||||||||||||||||||||| | |||| | Sbjct 1641 CGCAATACCAAGTGCAATGTTGATTCTTTTTGAATATTGTAGTCGGAAAGTGTGCGACCA 1582 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | || || || || |||| | ||| || ||||| || || | || ||||| Sbjct 1581 TCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTG 1522 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| ||| | |||| | |||||| | || ||| || || ||||| || Sbjct 1521 TCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAGGGTTCGACCTCAAGAGTGATG 1462 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGC 27250 | || |||||||| ||||| || || || ||||| || Sbjct 1461 GTCTTACCCGTCAGGGTTTTGACGAATATCTGCATGGC 1424 >seq125840 Length=3442 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 |||||||||||| || || || ||||| |||||||||||| || | |||| | ||||| Sbjct 747 TACCAAATGTAAGGTGGATTCCTTTTGGATATTGTAGTCGGACAAGGTGCGACCATCTTC 688 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | |||||||||||| | || | ||| |||||||| || || | ||| ||||| || Sbjct 687 CAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTG 628 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTC-TGTGGCTTCAACTTCTAGAGTTATAGATT 27216 ||| || || | |||| | ||||| | ||| || ||||| | || || | | Sbjct 627 GATTTTAGCCTTGACATTTTCAATGGTGTCGTAAGGC-TCGACTTCCAAGGTAATGGTCT 569 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || | |||||| || ||||| ||||| Sbjct 568 TACCAGTTAAAGTTTTGACGAAGATCTGCAT 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423911517831120