Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq41982 102 1e-16
seq154177 89.7 6e-13
>seq41982
Length=5201
Score = 102 bits (112), Expect = 1e-16
Identities = 239/356 (67%), Gaps = 15/356 (4%)
Strand=Plus/Minus
Query 118515 AAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 118574
||||| ||| || || ||||| || ||||| | |||||| || ||||| | | ||||
Sbjct 2643 AAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGATTA 2584
Query 118575 GACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 118634
|| |||| || | || |||||||| || | || || | | || |||||||||
Sbjct 2583 GATTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGATTTTTG 2524
Query 118635 GTGACAACCTTTGTGAT-TTCATGAAGCTTTTCGTAATCAAAACTGCGA--GTCTCTTCA 118691
|| | || || || | || | || |||| ||| | | ||| || | ||||
Sbjct 2523 GTAATGACTTTAGTAACATTTTTTAA---TTTCTTAA-----AGT-CGAATGTTTTTTCA 2473
Query 118692 T---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 118748
| ||| || || |||||| ||||| |||| ||||||||| | |||||||
Sbjct 2472 GGCGTCACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCATCGGGT 2413
Query 118749 TCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTT 118808
| | ||||||| ||||||||| |||||||| | |||||| ||||| | || |
Sbjct 2412 GCGGAATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCAATATTTTGC 2353
Query 118809 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTC 118864
|| || ||| ||||| ||||||||||| | |||||| || || || || ||
Sbjct 2352 TGGTTACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTTC 2297
>seq154177
Length=6269
Score = 89.7 bits (98), Expect = 6e-13
Identities = 110/148 (74%), Gaps = 2/148 (1%)
Strand=Plus/Plus
Query 179064 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 179123
||| ||||||||| | | ||| || || || ||||| | ||||| || | |||||| ||
Sbjct 2290 ATCCTTGCCACCCGTCAAACGAGTACCGAACTGACCTCTAGGCTCTAGCAAATTGATGTT 2349
Query 179124 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 179182
|| ||||||| || | | |||||| || || || || || || || || || ||||
Sbjct 2350 ATTAGAACCCACATAATTCTGGGCCAAATTAACGATGGTCATTTGC-AGCGACACCTCAC 2408
Query 179183 CGTGATGGTAAGCCGACTTGTCCGCCAC 179210
||||||||||||| ||| | || |||||
Sbjct 2409 CGTGATGGTAAGCAGACATTTCAGCCAC 2436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 616908360795600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |