Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq195284 82.4 9e-11 >seq195284 Length=2243 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 9698 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 9757 || || ||||| || ||||| ||||| | || || || ||||| ||| || | | || Sbjct 1382 CCAACAGCATCGATTTCATCTATGAACAGAATACAAGGAGCATTTTTGCGTGCCATTGCA 1441 Query 9758 AAGAGATCCCGTACACGCTTGGCG--CCCACACCAACAAACATCTCCACAAAGTTTGCGG 9815 || | ||| || ||| |||| | ||||||||||||||||| |||| ||| | || Sbjct 1442 AACATATCACG--CACTCTTGAGGGACCCACACCAACAAACATTTCCAAAAACTCTGATC 1499 Query 9816 CGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCT 9875 ||||| || || || || |||| ||| || || ||||| |||||| | || | Sbjct 1500 CGGAAACCGTAATAAAAGGCACGTTAGCTTCTCCTGCGGTGGCTTTGGCGAGTAATGTTT 1559 Query 9876 TACCCGTACCTGG 9888 ||||||| || || Sbjct 1560 TACCCGTGCCAGG 1572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581820801992400