Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq91934 105 7e-18
seq154177 95.1 1e-14
>seq91934
Length=4437
Score = 105 bits (116), Expect = 7e-18
Identities = 298/449 (66%), Gaps = 13/449 (3%)
Strand=Plus/Minus
Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843
||||| ||||| || || | ||||||||||||||| ||||| ||||| | |||||| ||
Sbjct 3363 ATCAACTCATTGGAGAATGTAAGGCCAGGCATAAGACCACGTTTCTTTAGCCAAAATATC 3304
Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC 74903
| | || ||||||||||| ||||| || ||| ||||| || | || |||||
Sbjct 3303 GAAGCAAAACTGCCACTGAAGAAAATGCCCTCCACAGCGGCAAATGCAATAATGCGTTCA 3244
Query 74904 GCGAA--CGGTGCATCGGAAGTC-ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACC 74960
| || || || || | ||||||| | ||||| || || || || || ||
Sbjct 3243 CCAAAATTGGCCGATTTTGAGCCAATCCAAGACATTGCCCAATCGGCCTTGCGCTTAACA 3184
Query 74961 GCAGGGACAGTATCGATCGCTTGGAAGAG--GCTTGCCTTCTCTTCGGGATCCTTGACG- 75017
|| || | || || || || | ||||| | || | | |||| |||| || | |
Sbjct 3183 GCTGGCATCGTTTCAATGGCATTAAAGAGATAATCGCGT--TGTTCGCGATCTTTAATGT 3126
Query 75018 AGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTAC 75077
||| |||| |||| || ||| | || || || | || || ||| |
Sbjct 3125 AGC-TGTCGATCAAAATACTATACATTTCAGAGTGTACATTTTCCATGGCAATTTGGAAA 3067
Query 75078 GCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAA--TTCATGTCGATAT 75135
| |||||| | || ||||||| || ||||| || | |||||| |||| | | ||
Sbjct 3066 CCATAGAAACAGCGTGCCTCTGTAACTTGTACCTCTTGGGAAAAACGTTCA--ACAAGAT 3009
Query 75136 TCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGC 75195
| || |||| || || || || || || || || ||||| || | |||||||| |
Sbjct 3008 TTTCATTGACAATACCATCGGAAGCAGCAAAGAAGGCCAGAACATGTGAGATAAAGTAAC 2949
Query 75196 GCTCATCGTCAGTGAGTTTGTCCCAATCC 75224
|||||| ||| |||||||| ||||| |||
Sbjct 2948 GCTCATTGTCGGTGAGTTTTTCCCAGTCC 2920
>seq154177
Length=6269
Score = 95.1 bits (104), Expect = 1e-14
Identities = 187/277 (68%), Gaps = 10/277 (4%)
Strand=Plus/Plus
Query 117304 AGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363
||||||||| ||||||| ||| || |||||||||||| | | ||| |||||||| ||
Sbjct 2263 AGTGAAAATATAACGAGCGCTAGCGCAATCCTTGCCACCCGTCAAACGAGTACCGAACTG 2322
Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423
|| || ||||| | | || | ||| || | |||||| | || || ||||| || ||
Sbjct 2323 ACCTCTAGGCTCTAGCAAATTGATGTTATTAGAACCCACATAATTCTGGGCCAAATTAAC 2382
Query 117424 AATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCC 117483
|| || ||| || | ||||||| || || || || | | || ||||| | ||
Sbjct 2383 GATGGTCATTTGCAGCGACACCTCACCGTGATGGTAAGCAGACATTTCAGCCACCGAACC 2442
Query 117484 CGCCAGCTGAGCCAC-----CTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAA 117538
| || || ||||| |||| || || ||| | || |||| ||| | |
Sbjct 2443 AGAAAGTTGGGCCACCTTGACTTCGCGTTTGTCGTTACGT-----TTGAAGCAAGTGAAC 2497
Query 117539 ATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCA 117575
|| ||||| || |||| ||||| | ||||||| |||
Sbjct 2498 ATGACCTTACGTTGACCGGGCTTAAAACCATCCACCA 2534
Score = 91.5 bits (100), Expect = 2e-13
Identities = 209/313 (67%), Gaps = 4/313 (1%)
Strand=Plus/Plus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| ||||| || || || ||||| || |||| ||||| || | ||| |||| || | |
Sbjct 2111 CCAGTACCAATACCATCGGCACCATTAACCAATATCATGGGTATAAT--GGGCATATACC 2168
Query 151936 --TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993
| || || | || || || ||||| | | |||| || | | || |||| |
Sbjct 2169 ATTGAGGTTCGATCTTCTGGCCATCATCGACTTCATATTGCAGCAGAGGATCGTCATGGG 2228
Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCG 152053
||| ||||||| | |||| || || || | ||||| || || || | ||| ||
Sbjct 2229 GATGGAATATCAGACGAGCCAGTGGCGACATAATAGTGAAAATATAACGAGCGCTAGCGC 2288
Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113
|||||||||||| | || || || || ||||| || ||||| || | |||| ||
Sbjct 2289 AATCCTTGCCACCCGTCAAACGAGTACCGAACTGACCTCTAGGCTCTAGCAAATTGATGT 2348
Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCAC 152173
| || | ||||| ||||||| |||||||| || || || ||||| | | ||||
Sbjct 2349 TATTAGAACCCACATAATTCTGGGCCAAATTAACGATGGTCATTTGCAGCGACACCTCAC 2408
Query 152174 CGTGGTGATACGC 152186
|||| || || ||
Sbjct 2409 CGTGATGGTAAGC 2421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545864992098000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |