Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq64788 168 8e-37
seq177482 149 7e-31
seq125840 149 7e-31
>seq64788
Length=4825
Score = 168 bits (186), Expect = 8e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || ||||| | || |||||||| || || | ||||| || ||
Sbjct 2272 AATGCAAATCTTCGTGAAGACATTAACTGGCAAGACCATCACCTTAGAGGTCGAACCATC 2213
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| |||| |||| | |||||||||||||| || |||||||| ||||| ||||| ||
Sbjct 2212 TGATACTATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAGGGCATTCCCCCAGATCA 2153
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| |||||||||||||| ||||| ||||| || || | || || | | || || ||
Sbjct 2152 ACAACGTCTAATTTTTGCCGGTAAACAACTTGAAGACGGACGCACTTTGTCCGATTACAA 2093
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| ||||| ||||||||| | || | |||||||| |||||
Sbjct 2092 CATTCAAAAAGAATCTACTCTTCATTTGGTTCTACGTCTTCGTGGTGG 2045
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || ||| | || || || || || || | ||||| || ||
Sbjct 1359 ATGCAGATTTTCGTGAAAACGTTGACTGGAAAAACCATCACCTTGGAGGTAGAACCATCA 1300
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| |||| | |||||||| || || || ||||| || || |||||||||||
Sbjct 1299 GATACCATTGAAAATGTCAAGGCTAAGATCCAAGATAAGGAAGGTATCCCTCCAGACCAA 1240
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| | || || || |||||||| | ||||||| ||| ||||| | ||||| |||
Sbjct 1239 CAACGTTTGATCTTCGCCGGTAAGCAGTTGGAGGATGGTCGCACCCTCTCTGACTACAAT 1180
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||||||||| |||||| | || |||||||| ||||||||
Sbjct 1179 ATCCAAAAGGAATCCACCCTTCATTTGGTGTTGCGTCTCCGCGGTGG 1133
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| | || ||||| || || || | || ||||| || |
Sbjct 391 ATGCAGATTTTCGTTAAGACCTTGACTGGCAAAACCATCACCTTGGAAGTTGAACCATCT 332
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| |||| | || |||||||||||||| ||||| || ||||| |||||||||
Sbjct 331 GACACCATTGAAAATGTTAAAGCTAAAATTCAGGATAAGGAAGGTATTCCCCCAGACCAG 272
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| | || || || |||||||| | || |||| ||||| | | || || |||
Sbjct 271 CAACGTTTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGTACTTTGTCCGATTACAAT 212
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| |||||||| || | || |||||||| || |||||
Sbjct 211 ATTCAAAAGGAGTCCACTCTCCACTTGGTATTGCGTCTCCGTGGTGG 165
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| | || ||||| || || || | ||||||||| |
Sbjct 2043 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCTTCC 1984
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| | || ||||||||||| |||||||| ||||| |||||||| ||
Sbjct 1983 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 1924
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| | ||||| || ||||| ||| | || || | || || | | || || |||
Sbjct 1923 CAACGTTTGATTTTCGCCGGTAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 1864
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| ||||| || | ||| | || || ||| | || |||||
Sbjct 1863 ATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGG 1817
Score = 132 bits (146), Expect = 5e-26
Identities = 117/146 (80%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546
||||| || || || ||||| || || ||||||||||| || ||| | || || || |||
Sbjct 1003 GCTAAGATCCAAGATAAGGAAGGTATCCCTCCAGACCAACAACGTTTGATCTTCGCCGGT 944
Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606
||||| | ||||||| ||| ||||| | ||||| ||| |||||||||||||||| |||
Sbjct 943 AAGCAGTTGGAGGATGGTCGCACCCTCTCTGACTACAATATCCAAAAGGAATCCACCCTT 884
Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632
||| | || |||||||| ||||||||
Sbjct 883 CATTTGGTGTTGCGTCTCCGCGGTGG 858
Score = 107 bits (118), Expect = 2e-18
Identities = 118/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || || || | || ||||| ||||| || | || || ||| |
Sbjct 163 ATGCAAATCTTCGTTAAAACTTTGACTGGCAAAACTATCACATTGGAAGTAGAGCCTTCC 104
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| | ||||||||||| ||||| ||||| || ||||| || || |||
Sbjct 103 GATACCATTGAAAACGTCAAGGCTAAAATCCAGGATAAGGAAGGCATTCCCCCGGATCAG 44
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
|| ||| | ||||| ||||||||||| | || ||||
Sbjct 43 CAACGTTTGATTTTCGCTGGTAAGCAGTTGGAAGATG 7
Score = 96.9 bits (106), Expect = 4e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| ||||| | || ||||| ||||| || | |||||||| | |
Sbjct 856 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAAACTATCACCTTGGAGGTTGAACCCTCT 797
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| | ||||||||||| || || ||||| || ||||| ||||| |||
Sbjct 796 GATACTATTGAAAACGTCAAGGCTAAAATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 737
Query 27526 CAGCGT 27531
|| |||
Sbjct 736 CAACGT 731
>seq177482
Length=2829
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || ||||| || || || || ||||| || ||||||||||| || |
Sbjct 1427 ATGCAGATATTCGTCAAAACCCTGACGGGTAAGACCATCACTCTTGAGGTCGAACCCTCG 1486
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | || || || ||||||||||| || |||||||| ||||| |||
Sbjct 1487 GACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCACCAGATCAG 1546
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| | ||||||||||| |||||| | || |||| ||| || || | ||||| |||
Sbjct 1547 CAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACACTTTCCGACTACAAT 1606
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| ||||| || | || | || ||||| ||||| |||||
Sbjct 1607 ATTCAAAAAGAATCAACATTGCACTTGGTATTGCGCCTTCGTGGTGG 1653
>seq125840
Length=3442
Score = 149 bits (164), Expect = 7e-31
Identities = 176/237 (74%), Gaps = 1/237 (0%)
Strand=Plus/Plus
Query 27397 ATTACTATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455
|||| |||| ||||| ||||| ||||| || | || || ||||| ||||| | || ||
Sbjct 528 ATTATTATAGATGCAGATCTTCGTCAAAACTTTAACTGGTAAGACCATTACCTTGGAAGT 587
Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515
||| | || | ||||| |||| | ||||||||||| || ||||| || || |||||
Sbjct 588 CGAGCCTTACGACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCC 647
Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575
||||| || || ||| | || || || ||||| ||| | || |||| ||| ||| | |
Sbjct 648 CCCAGATCAACAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGTC 707
Query 27576 AGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||| ||| |||||||||||||||| | ||| | || | |||||||| |||||
Sbjct 708 CGACTACAATATCCAAAAGGAATCCACCTTACATTTGGTACTCCGTCTTCGTGGTGG 764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568902374911200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |