Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq64788 138 3e-27
>seq64788
Length=4825
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| ||||||||||| ||||| || || ||||| | | || | |||||||||| |||
Sbjct 188 GTGGAGAGTGGACTCCTTTTGAATATTGTAATCGGACAAAGTACGGCCATCTTCCAACTG 247
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| | ||||| ||||| || |||| |||||||| ||||| || ||
Sbjct 248 CTTACCGGCGAAGATCAAACGTTGCTGGTCTGGGGGAATACCTTCCTTATCCTGAATTTT 307
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| || ||||| ||||||||||| |||||| || | ||||| || || || ||
Sbjct 308 AGCTTTAACATTTTCAATGGTGTCAGATGGTTCAACTTCCAAGGTGATGGTTTTGCCAGT 367
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| ||||| || || | ||||||
Sbjct 368 CAAGGTCTTAACGAAAATCTGCAT 391
Score = 132 bits (146), Expect = 1e-25
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||| ||||| || |||||||| || || || | ||||| | ||||| |||| ||||
Sbjct 1157 TGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGAGAGGGTGCGACCATCCTCCAACTGC 1216
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || |||||||| | ||||||||||| ||||| | |||||||| || ||||||||
Sbjct 1217 TTACCGGCGAAGATCAAACGTTGTTGGTCTGGAGGGATACCTTCCTTATCTTGGATCTTA 1276
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| || ||||| ||||| || || ||| ||||| | ||||| || ||||| ||
Sbjct 1277 GCCTTGACATTTTCAATGGTATCTGATGGTTCTACCTCCAAGGTGATGGTTTTTCCAGTC 1336
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
| || || || || | ||||||
Sbjct 1337 AACGTTTTCACGAAAATCTGCAT 1359
Score = 123 bits (136), Expect = 6e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| || | || ||| | |||||| || ||||||||||||||||| ||||| | | ||
Sbjct 1595 CGGAGACGTAAGACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAATCGGACAATGTA 1654
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||||||||| || || || ||||| || | || ||||| || || |||| |||
Sbjct 1655 CGTCCATCTTCCAATTGTTTACCAGCGAAAATTAAACGCTGTTGATCTGGGGGAATACCT 1714
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| ||||| ||||| || ||| || ||||| ||||| || || ||| ||||| |
Sbjct 1715 TCTTTGTCTTGGATTTTAGCTTTAACATTTTCTATGGTATCCGATGGTTCGACCTCTAAT 1774
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| | || || || || | |||||
Sbjct 1775 GTAATTGTTTTTCCCGTTAATGTTTTAACGAATATTTGCAT 1815
Score = 111 bits (122), Expect = 4e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| || | || ||| | ||||| || ||||| ||||| ||||| ||||| | | ||
Sbjct 1367 CGGAGACGTAAGACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAATCGGACAATGTA 1426
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||||||||| || || || |||||||| | |||||||| || || |||| |||
Sbjct 1427 CGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGGGGAATACCT 1486
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| || || || || || || || ||||| || ||||| || |||||| || |
Sbjct 1487 TCTTTATCTTGAATTTTGGCCTTTACATTTTCAATAGTGTCGGATGGTTCAACTTCTAAG 1546
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || ||||| || | ||||| || || | ||||||
Sbjct 1547 GTAATTGTTTTTCCTGTCAAGGTCTTAACGAAAATCTGCAT 1587
Score = 102 bits (112), Expect = 2e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||| ||||| || |||||||| || || || | ||||| | ||||| |||| ||||
Sbjct 882 TGAAGGGTGGATTCCTTTTGGATATTGTAGTCAGAGAGGGTGCGACCATCCTCCAACTGC 941
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || |||||||| | ||||||||||| ||||| | |||||||| || ||||||||
Sbjct 942 TTACCGGCGAAGATCAAACGTTGTTGGTCTGGAGGGATACCTTCCTTATCTTGGATCTT 1000
Score = 98.7 bits (108), Expect = 2e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| || |||||||| || || ||||| | | || | || ||||||| || || ||
Sbjct 1847 GTAGATTCTTTTTGTATATTGTAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTACCG 1906
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
||||| || | |||||||| || ||||| | |||||||||||| || || || |||
Sbjct 1907 GCGAAAATCAAACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTA 1966
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| ||||| || || || || |||||||| | ||||| || || || || | |||
Sbjct 1967 ACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAGGTGATGGTTTTGCCAGTCAATGTC 2026
Query 211098 TTTACAAACACCTGCAT 211114
|| ||||| | |||||
Sbjct 2027 TTGACAAAGATTTGCAT 2043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1156218653571150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |