Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq60894 82.4 7e-11 >seq60894 Length=6180 Score = 82.4 bits (90), Expect = 7e-11 Identities = 94/123 (76%), Gaps = 5/123 (4%) Strand=Plus/Minus Query 92311 TTATTGCAAT--TTTAAGAAAAATATACACGAATAAAAGTGGCAAAAGGTTTGCGGCACA 92368 ||||| ||| |||| |||||||||||||| |||| | |||||||| ||| || |||| Sbjct 2823 TTATTATAATAATTTATGAAAAATATACACGCATAACATCGGCAAAAGCTTTTCGACACA 2764 Query 92369 TGGGACATGTTGGATTAATAGAAAACGCACACTTGACACACGCCACAATATGACCGCAAG 92428 |||||| |||| | | || | ||||||||| |||| ||||| | |||||| || | Sbjct 2763 GGGGACA-CTTGG--TCACGGACGAAGCACACTTGGCACAGGCCACCACATGACCACAGG 2707 Query 92429 GTA 92431 ||| Sbjct 2706 GTA 2704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428511617966630