Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq41982 634 8e-177 seq91934 307 1e-78 seq39385 91.5 2e-13 >seq41982 Length=5201 Score = 634 bits (702), Expect = 8e-177 Identities = 1518/2272 (67%), Gaps = 28/2272 (1%) Strand=Plus/Minus Query 76772 CTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACC 76831 |||||||| ||||| || || | | | ||| |||||||| | | ||| ||||| || Sbjct 3364 CTTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCC 3305 Query 76832 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891 || |||| || |||| | |||||||| || |||| ||| || | || Sbjct 3304 GGTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGG 3245 Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 76951 || || | ||| ||||| | |||||||||||||||||||||||| || | ||| || || Sbjct 3244 TTCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGC 3185 Query 76952 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 77011 ||||| ||| ||||||| | ||| ||||||| || || | | | ||||| Sbjct 3184 CATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATC 3125 Query 77012 ATCTGGAAGGTT-TGTATT--TTGAATGGAACCACCATCTGATATAATTGTATTCTTTAT 77068 | |||| | | ||| ||| || || || | || || |||||| | || || || Sbjct 3124 TTTGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTCAT 3065 Query 77069 ATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128 || |||| ||| | | | || |||||| || | || | |||| |||| || || | Sbjct 3064 TTCGTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATATT 3005 Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 |||||||| || | || | | || |||||||| |||||| || || | ||||| Sbjct 3004 GAATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGATTC 2945 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248 ||| || ||||| ||||| || ||||| ||||| |||||||| |||| | ||| ||| Sbjct 2944 ATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAATT 2885 Query 77249 TCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307 || | |||||| |||| ||||||| ||||| | | | |||| | ||| | ||| | || Sbjct 2884 TCGTACACCATGCTGTT-TGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTAG 2826 Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATG 77367 | || ||| | |||||||||||| || || ||||| | | || ||| | Sbjct 2825 GAGTTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGATAAG 2766 Query 77368 TTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAA 77427 |||||||||| ||| |||| | | ||||||||| ||||||||||| || ||||||| Sbjct 2765 TTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATAATAAA 2706 Query 77428 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTA 77487 | ||||||||||| | | ||| | || | || || | || || | | Sbjct 2705 TAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAAACGCA 2646 Query 77488 AAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 77547 | ||| || | || || | ||||| || || || |||||||| | ||| | || Sbjct 2645 TTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGAT 2586 Query 77548 TGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTC 77607 | || | | || || || | ||||||| | ||||||||||| ||||| ||||||||| Sbjct 2585 TAGATTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGATTTT 2526 Query 77608 TAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA---TCTTCCATCTATAA 77664 | || |||||| || | |||| ||| ||| || || | || || | | Sbjct 2525 TGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGTTTTTTCAGGCGTCA 2466 Query 77665 CAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCAT 77724 ||||||| || | ||||| || || | |||||| || |||| ||||| | || || Sbjct 2465 CAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCATCGGGTGCGGAAT 2406 Query 77725 ATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGC 77784 | | || || || ||||| | ||||| || || |||||||| | |||||| ||||| | Sbjct 2405 ACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCAATATTTTGCTGGTTAC 2346 Query 77785 TCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATT 77844 |||| ||| || | ||||| || | || | ||||| || ||||| | || | || Sbjct 2345 TCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTTCTACTTGAGCTT 2286 Query 77845 CGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATA-GATTTGTATCGCCTCTCTCT 77902 | || || | ||| | || || || || | || | |||| | |||| || | Sbjct 2285 CAATTATGGCAAACCA-AAGAGCCTGGGCCTTGACGGTACGGTTTGCTTTGCCT-TCATT 2228 Query 77903 TTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCA 77962 |||||| | ||||| | ||| ||||| | |||||||| || | || ||||| || Sbjct 2227 TTCATACTTGGTATACAATTCTTCGAATTCCGCACCCCAAACTTCCTGCAGACCAGGACA 2168 Query 77963 TTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATC 78022 || | || ||||| || ||||| || |||| ||| | |||| ||||||||| | ||| Sbjct 2167 TTTGTGGGGACACATTAACGACCAATCTCCATTTTCTTCTACTCTTTTCATAAACAAATC 2108 Query 78023 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTT 78082 |||||||| || ||| |||||||||| | ||| || ||||| || || ||||| || Sbjct 2107 GGGTATCCACAGGGCATAGAATAGATCTCTAGCTCTGTGCTCTTCCTTGCCGGTATTTTT 2048 Query 78083 TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAAC 78142 || | ||| | ||| || | |||||| |||||||| || || | ||| || || | | Sbjct 2047 CTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATGGCAAATGC 1988 Query 78143 TCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAA 78202 ||| || ||||| || || ||||||| ||| | ||| || ||| | || || | Sbjct 1987 TCCTGGACGTTTGCCGCCGCCTTGATCTACATAGCGGGCAACATTGTTAAACACCCTAAG 1928 Query 78203 CATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCG 78262 ||| || | | || || || || || || || ||| || || | || |||| || Sbjct 1927 CATGGGCACCAGTCCATTTGAGGTGCCGTTAGTACCATCGATGGAAGTGCC-CTTG-GCC 1870 Query 78263 AATAT-TACT-AATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT 78320 ||| | | | | || || || || || || || || || | ||||| || Sbjct 1869 CTTATGCAGTGCACGTTAATGCCAATACCACCAGCAGATTTGGAAATCATGGCGCATTGT 1810 Query 78321 TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380 | || || | | | ||||| || ||| ||| ||| |||| | | ||| || || Sbjct 1809 TCCACTGACTTGAAAATACCTTCAATAGAATCAGCCACCATGGTCAAAAGGAAGCACGAT 1750 Query 78381 GACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440 |||| ||| | | || | ||| ||| || || || || ||||| ||||| | Sbjct 1749 GACAATTGTGGTCGCGGGGTAGCAGCAGCAAACAAAGTGGGCGAGGCATGTGTAAAATAA 1690 Query 78441 TTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500 ||||| | | || || ||||| || || || |||||||| | ||| || ||| Sbjct 1689 CGCTCAGACAACAAGTTATAAGTTTCGATGGCCGAATCTATGTCATCTCCATGTATACCT 1630 Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAAC 78560 | ||||| | ||| ||||||||||| ||||||||||| ||||| ||| ||||||| | Sbjct 1629 ATAGCTACTCTCATTAACATATGCTGTGGTCTTTCAACAATCTTACCATTCATTTTCAGC 1570 Query 78561 AAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAA 78620 || || ||| | |||| || || || |||||||| ||||| |||||| | || ||| Sbjct 1569 AAATAGGATCTCTCCAGTGTCTTGAATCCAAAATAATTGTAGCCAAAGTCACGATCATAA 1510 Query 78621 ATAATAACAGAATTTA---GTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTT 78677 ||||| ||||| | ||| | || | | ||| | | ||| | | Sbjct 1509 ATAATGGACGAATTCAAACGTTCTGCATTCTTCTGCACCACATTGT-AGTGATACT--CC 1453 Query 78678 GAAATAATAGGAGA--TCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCA 78735 ||||| || || || | ||| | | || | |||||||| | | | | ||| | Sbjct 1452 GAAATCATGGGCGAAGTTTTACCCGTCTCTTTG--TTAACATAATGATACAGATCACTTA 1395 Query 78736 TTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAG 78795 | || || ||||| |||||| ||||||||||| | ||| || || || || | || | Sbjct 1394 TAACCTCTGAAAATACTTTTTTCGTTTCCTTGTGCAAATTGGAGACGGCAATACGAGCCG 1335 Query 78796 CTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAA 78855 | | || ||||||||| ||| | ||| || | || || ||| | || || || ||| Sbjct 1334 CCAATATGGCATAATCACCATGATTTGTTGTCAATGTAGCAGCTGTCTCGGCTGCCAAAT 1275 Query 78856 TATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCGATTT 78915 | || |||||| |||||| || ||| |||| || | |||||||||| | || Sbjct 1274 TGTCCAACTCTTGAGTTGTAACACCACAGTATAAGCCATTGATAACTTTCAGTGTAATGG 1215 Query 78916 TGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAATACGAGATGTGA 78975 || || || ||||| || | || |||||||| || | ||| |||||||||||| | Sbjct 1214 CCACTGGGTCAACAAAATCCATATTTAATCCATAGCAAAGCTTTTGAATACGAGATGTAA 1155 Query 78976 TTTTATC-AAATATAACATTCTCCTTGCATCCATTTCGTTTAATAACGAACA 79026 ||||||| |||| | || | ||| |||| |||| |||||||| ||| |||| Sbjct 1154 TTTTATCGAAATGT-ACTTCCTCTTTGCGGCCATCTCGTTTAAGAACAAACA 1104 >seq91934 Length=4437 Score = 307 bits (340), Expect = 1e-78 Identities = 495/705 (70%), Gaps = 15/705 (2%) Strand=Plus/Minus Query 47975 ATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAAC 48034 ||| || || ||||| |||||| ||||| || ||||||||| || || | || || Sbjct 3565 ATCAGCTACAAATTCAATATATTCCGACATCAATTTACAATTCATGCCAATCAAATTGAC 3506 Query 48035 TGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGT 48094 || | ||| || || | ||||||||||| || | ||||| ||| |||||| || Sbjct 3505 GGGCAAAGCTTCGGTTAAGAACTCTTGTTCAATTTTTACAGCTTCCGTTATTATTTCGGT 3446 Query 48095 TACCGTTTCCTCAC---TTGGTGGATACAACAAATGTTTAAACATTAA-ACATGCAAAAT 48150 || || ||||| | || | | | ||||||||||||||||| ||| ||||||| Sbjct 3445 TA---TTCTCTCACGGCTGGGACGTTGTATTAAATGTTTAAACATTAACACA-GCAAAAT 3390 Query 48151 CACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTA 48210 ||||||| | ||| || || | | ||| || || || || ||||| || || ||||| | Sbjct 3389 CACAATGTAAACCCTCGTCACGAGAAATCAACTCATTGGAGAATGTAAGGCCAGGCATAA 3330 Query 48211 GTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 48270 | |||||||| || ||||||||||| | || ||| ||| ||||| ||||| || | Sbjct 3329 GACCACGTTTCTTTAGCCAAAATATCGAAGCAAAACTGCCACTGAAGAAAATGCCCTCCA 3270 Query 48271 CGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG---TTGTGT--ATCCACCG 48325 | || |||||||| ||| | || || || |||| || ||| | ||||| Sbjct 3269 CAGCGGCAAATGCAATAATGCGTTCACCAAAATTGGC--CGATTTTGAGCCAATCCAAGA 3212 Query 48326 TTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 48385 ||||||||| ||||| ||| ||| ||||| ||||| || |||||||||||| | Sbjct 3211 CATTGCCCAATCGGCCTTGCGCTTAACAGCTGGCATCGTTTCAATGGCATTAAAGAGATA 3152 Query 48386 GtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTG 48445 | || | || |||||||| ||| | || || |||| |||||||||||| ||||| Sbjct 3151 ATCGCGTTGTTCGCGATCTTTAATGTAGCTGTCGATCAAAATACTATACATTTCAGAGTG 3092 Query 48446 AATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505 | |||||| || || || || || || || ||||| | || ||||| | |||||||| Sbjct 3091 TACATTTTCCATGGCAATTTGGAAACCATAGAAACAGCGTGCCTCTGTAACTTGTACCTC 3032 Query 48506 CGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGC 48565 |||| |||||| | | ||| ||||| || || ||||| ||||||||| || || Sbjct 3031 TTGGGAAAAACGTTCAACAAGATTTTCATTGACAATACCATCGGAAGCAGCAAAGAAGGC 2972 Query 48566 TAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATC 48625 | |||||| ||||| || || ||| || ||||| | |||||| |||| Sbjct 2971 CAGAACATGTGAGATAAAGTAACGCTCATTGTCGGTGAGTTTTTCCCAGTCCGAATTATC 2912 Query 48626 TTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 ||| || | |||||||||||| | |||||||| ||||| || || Sbjct 2911 TTTAGAGAGATCTACTTCTTCTACAGTCCAAAAAGATGCTTCAGC 2867 >seq39385 Length=6125 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 42683 GTATCGGTAAAGTAATTTCCTGTCCAATTTGATGTGCCTATATACGCCGTTTTATCGGTT 42742 ||||||||||| |||| || | ||| ||||| || || ||||| || || ||||| ||| Sbjct 1928 GTATCGGTAAAATAATCACCCGACCAGTTTGACGTTCCAATATAGGCTGTATTATCTGTT 1987 Query 42743 ACCATATATTTTGCGTGATTTACTCGGGAATACGGAAT 42780 ||||||||||| |||||| ||||||| ||| ||||| Sbjct 1988 ACCATATATTTGTTGTGATTCACTCGGGCATAAGGAAT 2025 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 43294 AATTCCCAATTCCTTGACCTGTGTTAGAGATCGCCAATCCATGTTAGCACTTCCTAAATA 43353 ||| |||| || ||||| || |||| ||||| ||| ||||| || ||||| || | ||| Sbjct 2557 AATGCCCAGCTCTTTGACTTGGGTTAAAGATCTCCAGTCCATATTTGCACTGCCCAGATA 2616 Query 43354 AATATGTCTATTATCTGATATCCAAAATTTAGTATGAAGAACTCCACCT 43402 ||| ||| |||| || || ||||||||||| || || | ||| || ||| Sbjct 2617 AATGTGTTTATTGTCCGAAATCCAAAATTTTGTGTGTAAAACACCTCCT 2665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692953749566400