Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq41982 634 8e-177
seq91934 307 1e-78
seq39385 91.5 2e-13
>seq41982
Length=5201
Score = 634 bits (702), Expect = 8e-177
Identities = 1518/2272 (67%), Gaps = 28/2272 (1%)
Strand=Plus/Minus
Query 76772 CTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACC 76831
|||||||| ||||| || || | | | ||| |||||||| | | ||| ||||| ||
Sbjct 3364 CTTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCC 3305
Query 76832 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891
|| |||| || |||| | |||||||| || |||| ||| || | ||
Sbjct 3304 GGTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGG 3245
Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 76951
|| || | ||| ||||| | |||||||||||||||||||||||| || | ||| || ||
Sbjct 3244 TTCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGC 3185
Query 76952 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 77011
||||| ||| ||||||| | ||| ||||||| || || | | | |||||
Sbjct 3184 CATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATC 3125
Query 77012 ATCTGGAAGGTT-TGTATT--TTGAATGGAACCACCATCTGATATAATTGTATTCTTTAT 77068
| |||| | | ||| ||| || || || | || || |||||| | || || ||
Sbjct 3124 TTTGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTCAT 3065
Query 77069 ATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128
|| |||| ||| | | | || |||||| || | || | |||| |||| || || |
Sbjct 3064 TTCGTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATATT 3005
Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188
|||||||| || | || | | || |||||||| |||||| || || | |||||
Sbjct 3004 GAATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGATTC 2945
Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248
||| || ||||| ||||| || ||||| ||||| |||||||| |||| | ||| |||
Sbjct 2944 ATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAATT 2885
Query 77249 TCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307
|| | |||||| |||| ||||||| ||||| | | | |||| | ||| | ||| | ||
Sbjct 2884 TCGTACACCATGCTGTT-TGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTAG 2826
Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATG 77367
| || ||| | |||||||||||| || || ||||| | | || ||| |
Sbjct 2825 GAGTTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGATAAG 2766
Query 77368 TTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAA 77427
|||||||||| ||| |||| | | ||||||||| ||||||||||| || |||||||
Sbjct 2765 TTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATAATAAA 2706
Query 77428 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTA 77487
| ||||||||||| | | ||| | || | || || | || || | |
Sbjct 2705 TAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAAACGCA 2646
Query 77488 AAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 77547
| ||| || | || || | ||||| || || || |||||||| | ||| | ||
Sbjct 2645 TTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGAT 2586
Query 77548 TGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTC 77607
| || | | || || || | ||||||| | ||||||||||| ||||| |||||||||
Sbjct 2585 TAGATTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGATTTT 2526
Query 77608 TAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA---TCTTCCATCTATAA 77664
| || |||||| || | |||| ||| ||| || || | || || | |
Sbjct 2525 TGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGTTTTTTCAGGCGTCA 2466
Query 77665 CAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCAT 77724
||||||| || | ||||| || || | |||||| || |||| ||||| | || ||
Sbjct 2465 CAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCATCGGGTGCGGAAT 2406
Query 77725 ATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGC 77784
| | || || || ||||| | ||||| || || |||||||| | |||||| ||||| |
Sbjct 2405 ACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCAATATTTTGCTGGTTAC 2346
Query 77785 TCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATT 77844
|||| ||| || | ||||| || | || | ||||| || ||||| | || | ||
Sbjct 2345 TCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTTCTACTTGAGCTT 2286
Query 77845 CGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATA-GATTTGTATCGCCTCTCTCT 77902
| || || | ||| | || || || || | || | |||| | |||| || |
Sbjct 2285 CAATTATGGCAAACCA-AAGAGCCTGGGCCTTGACGGTACGGTTTGCTTTGCCT-TCATT 2228
Query 77903 TTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCA 77962
|||||| | ||||| | ||| ||||| | |||||||| || | || ||||| ||
Sbjct 2227 TTCATACTTGGTATACAATTCTTCGAATTCCGCACCCCAAACTTCCTGCAGACCAGGACA 2168
Query 77963 TTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATC 78022
|| | || ||||| || ||||| || |||| ||| | |||| ||||||||| | |||
Sbjct 2167 TTTGTGGGGACACATTAACGACCAATCTCCATTTTCTTCTACTCTTTTCATAAACAAATC 2108
Query 78023 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTT 78082
|||||||| || ||| |||||||||| | ||| || ||||| || || ||||| ||
Sbjct 2107 GGGTATCCACAGGGCATAGAATAGATCTCTAGCTCTGTGCTCTTCCTTGCCGGTATTTTT 2048
Query 78083 TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAAC 78142
|| | ||| | ||| || | |||||| |||||||| || || | ||| || || | |
Sbjct 2047 CTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATGGCAAATGC 1988
Query 78143 TCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAA 78202
||| || ||||| || || ||||||| ||| | ||| || ||| | || || |
Sbjct 1987 TCCTGGACGTTTGCCGCCGCCTTGATCTACATAGCGGGCAACATTGTTAAACACCCTAAG 1928
Query 78203 CATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCG 78262
||| || | | || || || || || || || ||| || || | || |||| ||
Sbjct 1927 CATGGGCACCAGTCCATTTGAGGTGCCGTTAGTACCATCGATGGAAGTGCC-CTTG-GCC 1870
Query 78263 AATAT-TACT-AATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT 78320
||| | | | | || || || || || || || || || | ||||| ||
Sbjct 1869 CTTATGCAGTGCACGTTAATGCCAATACCACCAGCAGATTTGGAAATCATGGCGCATTGT 1810
Query 78321 TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380
| || || | | | ||||| || ||| ||| ||| |||| | | ||| || ||
Sbjct 1809 TCCACTGACTTGAAAATACCTTCAATAGAATCAGCCACCATGGTCAAAAGGAAGCACGAT 1750
Query 78381 GACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440
|||| ||| | | || | ||| ||| || || || || ||||| ||||| |
Sbjct 1749 GACAATTGTGGTCGCGGGGTAGCAGCAGCAAACAAAGTGGGCGAGGCATGTGTAAAATAA 1690
Query 78441 TTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500
||||| | | || || ||||| || || || |||||||| | ||| || |||
Sbjct 1689 CGCTCAGACAACAAGTTATAAGTTTCGATGGCCGAATCTATGTCATCTCCATGTATACCT 1630
Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAAC 78560
| ||||| | ||| ||||||||||| ||||||||||| ||||| ||| ||||||| |
Sbjct 1629 ATAGCTACTCTCATTAACATATGCTGTGGTCTTTCAACAATCTTACCATTCATTTTCAGC 1570
Query 78561 AAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAA 78620
|| || ||| | |||| || || || |||||||| ||||| |||||| | || |||
Sbjct 1569 AAATAGGATCTCTCCAGTGTCTTGAATCCAAAATAATTGTAGCCAAAGTCACGATCATAA 1510
Query 78621 ATAATAACAGAATTTA---GTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTT 78677
||||| ||||| | ||| | || | | ||| | | ||| | |
Sbjct 1509 ATAATGGACGAATTCAAACGTTCTGCATTCTTCTGCACCACATTGT-AGTGATACT--CC 1453
Query 78678 GAAATAATAGGAGA--TCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCA 78735
||||| || || || | ||| | | || | |||||||| | | | | ||| |
Sbjct 1452 GAAATCATGGGCGAAGTTTTACCCGTCTCTTTG--TTAACATAATGATACAGATCACTTA 1395
Query 78736 TTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAG 78795
| || || ||||| |||||| ||||||||||| | ||| || || || || | || |
Sbjct 1394 TAACCTCTGAAAATACTTTTTTCGTTTCCTTGTGCAAATTGGAGACGGCAATACGAGCCG 1335
Query 78796 CTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAA 78855
| | || ||||||||| ||| | ||| || | || || ||| | || || || |||
Sbjct 1334 CCAATATGGCATAATCACCATGATTTGTTGTCAATGTAGCAGCTGTCTCGGCTGCCAAAT 1275
Query 78856 TATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGCGATTT 78915
| || |||||| |||||| || ||| |||| || | |||||||||| | ||
Sbjct 1274 TGTCCAACTCTTGAGTTGTAACACCACAGTATAAGCCATTGATAACTTTCAGTGTAATGG 1215
Query 78916 TGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAATACGAGATGTGA 78975
|| || || ||||| || | || |||||||| || | ||| |||||||||||| |
Sbjct 1214 CCACTGGGTCAACAAAATCCATATTTAATCCATAGCAAAGCTTTTGAATACGAGATGTAA 1155
Query 78976 TTTTATC-AAATATAACATTCTCCTTGCATCCATTTCGTTTAATAACGAACA 79026
||||||| |||| | || | ||| |||| |||| |||||||| ||| ||||
Sbjct 1154 TTTTATCGAAATGT-ACTTCCTCTTTGCGGCCATCTCGTTTAAGAACAAACA 1104
>seq91934
Length=4437
Score = 307 bits (340), Expect = 1e-78
Identities = 495/705 (70%), Gaps = 15/705 (2%)
Strand=Plus/Minus
Query 47975 ATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAAC 48034
||| || || ||||| |||||| ||||| || ||||||||| || || | || ||
Sbjct 3565 ATCAGCTACAAATTCAATATATTCCGACATCAATTTACAATTCATGCCAATCAAATTGAC 3506
Query 48035 TGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGT 48094
|| | ||| || || | ||||||||||| || | ||||| ||| |||||| ||
Sbjct 3505 GGGCAAAGCTTCGGTTAAGAACTCTTGTTCAATTTTTACAGCTTCCGTTATTATTTCGGT 3446
Query 48095 TACCGTTTCCTCAC---TTGGTGGATACAACAAATGTTTAAACATTAA-ACATGCAAAAT 48150
|| || ||||| | || | | | ||||||||||||||||| ||| |||||||
Sbjct 3445 TA---TTCTCTCACGGCTGGGACGTTGTATTAAATGTTTAAACATTAACACA-GCAAAAT 3390
Query 48151 CACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTA 48210
||||||| | ||| || || | | ||| || || || || ||||| || || ||||| |
Sbjct 3389 CACAATGTAAACCCTCGTCACGAGAAATCAACTCATTGGAGAATGTAAGGCCAGGCATAA 3330
Query 48211 GTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 48270
| |||||||| || ||||||||||| | || ||| ||| ||||| ||||| || |
Sbjct 3329 GACCACGTTTCTTTAGCCAAAATATCGAAGCAAAACTGCCACTGAAGAAAATGCCCTCCA 3270
Query 48271 CGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG---TTGTGT--ATCCACCG 48325
| || |||||||| ||| | || || || |||| || ||| | |||||
Sbjct 3269 CAGCGGCAAATGCAATAATGCGTTCACCAAAATTGGC--CGATTTTGAGCCAATCCAAGA 3212
Query 48326 TTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 48385
||||||||| ||||| ||| ||| ||||| ||||| || |||||||||||| |
Sbjct 3211 CATTGCCCAATCGGCCTTGCGCTTAACAGCTGGCATCGTTTCAATGGCATTAAAGAGATA 3152
Query 48386 GtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTG 48445
| || | || |||||||| ||| | || || |||| |||||||||||| |||||
Sbjct 3151 ATCGCGTTGTTCGCGATCTTTAATGTAGCTGTCGATCAAAATACTATACATTTCAGAGTG 3092
Query 48446 AATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505
| |||||| || || || || || || || ||||| | || ||||| | ||||||||
Sbjct 3091 TACATTTTCCATGGCAATTTGGAAACCATAGAAACAGCGTGCCTCTGTAACTTGTACCTC 3032
Query 48506 CGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGC 48565
|||| |||||| | | ||| ||||| || || ||||| ||||||||| || ||
Sbjct 3031 TTGGGAAAAACGTTCAACAAGATTTTCATTGACAATACCATCGGAAGCAGCAAAGAAGGC 2972
Query 48566 TAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATC 48625
| |||||| ||||| || || ||| || ||||| | |||||| ||||
Sbjct 2971 CAGAACATGTGAGATAAAGTAACGCTCATTGTCGGTGAGTTTTTCCCAGTCCGAATTATC 2912
Query 48626 TTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670
||| || | |||||||||||| | |||||||| ||||| || ||
Sbjct 2911 TTTAGAGAGATCTACTTCTTCTACAGTCCAAAAAGATGCTTCAGC 2867
>seq39385
Length=6125
Score = 91.5 bits (100), Expect = 2e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 42683 GTATCGGTAAAGTAATTTCCTGTCCAATTTGATGTGCCTATATACGCCGTTTTATCGGTT 42742
||||||||||| |||| || | ||| ||||| || || ||||| || || ||||| |||
Sbjct 1928 GTATCGGTAAAATAATCACCCGACCAGTTTGACGTTCCAATATAGGCTGTATTATCTGTT 1987
Query 42743 ACCATATATTTTGCGTGATTTACTCGGGAATACGGAAT 42780
||||||||||| |||||| ||||||| ||| |||||
Sbjct 1988 ACCATATATTTGTTGTGATTCACTCGGGCATAAGGAAT 2025
Score = 84.2 bits (92), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 43294 AATTCCCAATTCCTTGACCTGTGTTAGAGATCGCCAATCCATGTTAGCACTTCCTAAATA 43353
||| |||| || ||||| || |||| ||||| ||| ||||| || ||||| || | |||
Sbjct 2557 AATGCCCAGCTCTTTGACTTGGGTTAAAGATCTCCAGTCCATATTTGCACTGCCCAGATA 2616
Query 43354 AATATGTCTATTATCTGATATCCAAAATTTAGTATGAAGAACTCCACCT 43402
||| ||| |||| || || ||||||||||| || || | ||| || |||
Sbjct 2617 AATGTGTTTATTGTCCGAAATCCAAAATTTTGTGTGTAAAACACCTCCT 2665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 692953749566400
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