Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01]
197,510 sequences; 459,231,066 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq41982 601 5e-167
seq91934 316 3e-81
>seq41982
Length=5201
Score = 601 bits (666), Expect = 5e-167
Identities = 1516/2278 (67%), Gaps = 40/2278 (2%)
Strand=Plus/Minus
Query 75367 CTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACC 75426
|||||||| || || || || | | | |||||||||||| | | ||| ||||| ||
Sbjct 3364 CTTATCCACAGTAAATTGTATAGCATTTGCTGCTGGTTTTGTCCTCAAATAATACATGCC 3305
Query 75427 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGG 75486
|| |||| || |||| | |||||||| || || | ||| || | ||
Sbjct 3304 GGTCTTTAAGCCTGCTTTCCAGGCATAGAAATGAATTGAGGTCAATTTACCGTAGTTGGG 3245
Query 75487 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 75546
|| || | ||| ||||| | |||||||||||||||||||||||| || | ||| || ||
Sbjct 3244 TTCAGCCACATGTATATTGAACGACTGACTTTGATCGATGAAAGCGCCACGATCGGCTGC 3185
Query 75547 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 75606
||||| ||| ||||||| | ||| ||||||| || || | | | |||||
Sbjct 3184 CATTTGAATAGTGGTCTTAACGGAAATCTCCCAAACTGTCTTATATAGATCACGAATATC 3125
Query 75607 ATCTGGAAGATT-TGTATT--TTGAATGGATCCGCCATCAGATATAATTGTATTCTTGAT 75663
| |||| | | ||| ||| || || |||| || || |||||| | || || ||
Sbjct 3124 TTTGGGAATTTCATCTATGGCTTGTATAGAGCCGCGATTGGAAATAATTCTGTTTTTCAT 3065
Query 75664 CTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTG 75723
|| |||| ||| | | | || |||||| || | || | |||| |||| ||||| |
Sbjct 3064 TTCGTCATCCCATAGATCACGTTCAGTTAAATCTTTTAGCAAATGATGATTGACAATATT 3005
Query 75724 AAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 75783
|||||||| || | || | || || |||||||| |||||| || || | |||||
Sbjct 3004 GAATTCTCCCGATAGCACACGTCTGGTATAAATATTGGAGGTATAAGGCTCAAATGATTC 2945
Query 75784 ATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATT 75843
||| || ||||| ||||| || || || ||||| |||||||| |||| | ||| |||
Sbjct 2944 ATTATTGCCCAAGATTTGTGCGGTAGAGGCAGTGGGCATAGGGGCCAATAGCAAAGAATT 2885
Query 75844 TCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATG 75902
|| | |||||| |||| ||||||| ||||| | | | |||| | ||| | ||| | |
Sbjct 2884 TCGTACACCATGCTGTT-TGATTTTCTCTTTCAACTCTGTCCAGTTCCACAAATCGGTAG 2826
Query 75903 GTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATG 75962
| || ||| | |||||||||||| || || || || | | || ||| |
Sbjct 2825 GAGTTTTATTCCACATATCGTATTGTAGTATGCCCTTACTTACCGGGCAGCCGGGATAAG 2766
Query 75963 TTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAA 76022
|||| |||| || |||||| | | ||| ||||| || || || || || |||||||
Sbjct 2765 TTTCATAAGGACCTAGCTTTTCGGACAATTCACAACTAGCTTCCAATGCGCCATAATAAA 2706
Query 76023 TTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTA 76082
| ||||||||||| | | ||| | ||| | || || | || || | |
Sbjct 2705 TAGTTTCGAAAATTTGTTGATTTAACAAAGCCGCCTTTTCGCTTTCGTAGGGGAAACGCA 2646
Query 76083 AAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 76142
| ||| |||| || || || ||||| || || || |||||||| | ||| | ||
Sbjct 2645 TTAAAATCAATGTGTCGGCAAGACCCTGCACACCTATGCCAATAGGACGATGACGTAGAT 2586
Query 76143 TGGAAATTTC--AGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200
| | ||||| || || || | ||| ||| | ||||| ||||| ||||| ||||||||
Sbjct 2585 T--AGATTTCCTGGCCTCCGGCAGAGGATAAAAGTTAATGTCTATGATTTTGTTGAGATT 2528
Query 76201 TCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA---TTTTCCATCTAT 76257
| || || |||||| || | |||| ||| ||| || || |||| || |
Sbjct 2527 TTTGGTAATGACTTTAGTAACATTTTTTAATTTCTTAAAGTCGAATGTTTTTTCAGGCGT 2468
Query 76258 CACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGC 76317
||||||||||||||| ||||| || || | |||||| ||||||| ||||| | ||
Sbjct 2467 CACAAACATATTAAGGGCTATTGAGGCCAAATTACACACGGCTATCTCATCGGGTGCGGA 2408
Query 76318 ATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTT 76377
||| | || || ||||| || | ||||| ||||| ||||| |||| |||||| |||||
Sbjct 2407 ATACTCTACAATTTCCGTACACAAGTTACTGCACTTAATAGTGCCAATATTTTGCTGGTT 2348
Query 76378 GCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGA 76437
||||| ||||| | ||||| || | | | ||||| || ||||| | || |
Sbjct 2347 ACTCTTACGATTACAGGCATCCTTGTACAACATGTAGGGAGTACCTGTTTCTACTTGAGC 2288
Query 76438 TTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATA-GATTTGTATCGCTTCTCT 76495
||| || || | ||| | || || || || | || | |||| | || | ||
Sbjct 2287 TTCAATTATGGCAAACCA-AAGAGCCTGGGCCTTGACGGTACGGTTTGCTTTGCCT-TCA 2230
Query 76496 CTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGA 76555
||||||| | ||||| || ||| ||||| | |||||||| || | || |||||||
Sbjct 2229 TTTTCATACTTGGTATACAATTCTTCGAATTCCGCACCCCAAACTTCCTGCAGACCAGGA 2170
Query 76556 CATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGA 76615
|||| | |||||||| || ||||| || |||| ||| | || | ||||||||| | |
Sbjct 2169 CATTTGTGGGGACACATTAACGACCAATCTCCATTTTCTTCTACTCTTTTCATAAACAAA 2110
Query 76616 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTC 76675
|| |||||||| || ||| |||||||||| | ||| | ||||| || || |||||
Sbjct 2109 TCGGGTATCCACAGGGCATAGAATAGATCTCTAGCTCTGTGCTCTTCCTTGCCGGTATTT 2050
Query 76676 TTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATA 76735
|| || | ||| | || || | |||||| |||||||| || || | ||| || || |
Sbjct 2049 TTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATGGCAAAT 1990
Query 76736 ACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTC 76795
| || || ||||| || || ||||||| ||| | |||| || ||| | || ||
Sbjct 1989 GCTCCTGGACGTTTGCCGCCGCCTTGATCTACATAGCGGGCAACATTGTTAAACACCCTA 1930
Query 76796 AACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCA 76855
| ||| || | | || || || || || || || ||| || || | || ||
Sbjct 1929 AGCATGGGCACCAGTCCATTTGAGGTGCCGTTAGTACCATCGATGGAAGTGCCCTTGGCC 1870
Query 76856 CGAAT--ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGC 76913
| || | | | | || ||| || || || || ||| || || | || ||
Sbjct 1869 CTTATGCAGTGCACGTTAAT--GCCAATACCACCAGCAGATTTGGAAATCATGGCGCATT 1812
Query 76914 GTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGC 76973
||| || || | | || || || ||| |||| ||| |||| | | ||| || ||
Sbjct 1811 GTTCCACTGACTTGAAAATACCTTCAATAGAATCAGCCACCATGGTCAAAAGGAAGCACG 1752
Query 76974 TAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACC 77033
|||| ||| | | || | ||| |||||| || || || ||||| || ||
Sbjct 1751 ATGACAATTGTGGTCGCGGGGTAGCAGCAGCAAACAAAGTGGGCGAGGCATGTGTAAAAT 1692
Query 77034 ATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTC 77093
| ||||| | | || || ||||| || | | ||||| || | ||| || |
Sbjct 1691 AACGCTCAGACAACAAGTTATAAGTTTCGATGGCCGAATCTATGTCATCTCCATGTATAC 1632
Query 77094 CTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCA 77153
||| ||| || | ||| ||||||||||| |||| ||| ||| ||||| ||| |||||||
Sbjct 1631 CTATAGCTACTCTCATTAACATATGCTGTGGTCTTTCAACAATCTTACCATTCATTTTCA 1572
Query 77154 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGT 77213
||| || ||| | |||| || || || |||||||| ||||| |||||| | || |
Sbjct 1571 GCAAATAGGATCTCTCCAGTGTCTTGAATCCAAAATAATTGTAGCCAAAGTCACGATCAT 1512
Query 77214 AAATAATAACCGAATT--TAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGT 77271
||||||| |||||| | || | | | | || | | || ||| |||| |
Sbjct 1511 AAATAATGGACGAATTCAAACGTTCTGCAT-TCTTCTGCACCA-----CATTGTAGTGAT 1458
Query 77272 A----GAAATAATTGGAGATCGTATT--CCATTTTTAGGATTAACATAGTTAAATAAGTC 77325
| ||||| || || || || || || | | | | |||||||| | | | | ||
Sbjct 1457 ACTCCGAAATCATGGGCGA-AGTTTTACCCGTCTCTTTG-TTAACATAATGATACAGATC 1400
Query 77326 TTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCT 77385
|| || || ||||| |||||| ||||||||||| | ||| || ||||| || |
Sbjct 1399 ACTTATAACCTCTGAAAATACTTTTTTCGTTTCCTTGTGCAAATTGGAGACGGCAATACG 1340
Query 77386 AGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGC 77445
||| || | || ||||| ||| ||| | ||| || | || || ||| | || || ||
Sbjct 1339 AGCCGCCAATATGGCATAATCACCATGATTTGTTGTCAATGTAGCAGCTGTCTCGGCTGC 1280
Query 77446 TAAAGTATCTAATTCTATAGTAGTAACTCCGTTATAT-AGCCCTTGAATAACTTTCATGG 77504
||| | || || ||| ||| ||||| || ||| |||| ||| |||||||||| |
Sbjct 1279 CAAATTGTCCAACTCTTGAGTTGTAACACCACAGTATAAGCCATTG-ATAACTTTCAGTG 1221
Query 77505 CTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTAATACGAG 77564
|| | || || ||||| || | || || ||||| || | ||| ||||||||
Sbjct 1220 TAATGGCCACTGGGTCAACAAAATCCATATTTAATCCATAGCAAAGCTTTTGAATACGAG 1161
Query 77565 ATGTGATTTTATCAAACATG-ACATTCTCCTTACATCCATTTCGTTTAATGACGAACA 77621
|||| |||||||| || ||| || | ||| || | |||| |||||||| || ||||
Sbjct 1160 ATGTAATTTTATCGAA-ATGTACTTCCTCTTTGCGGCCATCTCGTTTAAGAACAAACA 1104
>seq91934
Length=4437
Score = 316 bits (350), Expect = 3e-81
Identities = 498/704 (71%), Gaps = 13/704 (2%)
Strand=Plus/Minus
Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523
||| || || ||||| ||||| ||||| || ||||||||| || || | |||||
Sbjct 3565 ATCAGCTACAAATTCAATATATTCCGACATCAATTTACAATTCATGCCAATCAAATTGAC 3506
Query 46524 CGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGT 46583
|| | ||| || || | |||||||||||||| | ||||| |||| |||||| ||
Sbjct 3505 GGGCAAAGCTTCGGTTAAGAACTCTTGTTCAATTTTTACAGCTTCCGTTATTATTTCGGT 3446
Query 46584 TACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAA-ACATGCAAAATCAC 46642
|| | | || || || | || || ||||||||||||||||| ||| ||||||||||
Sbjct 3445 TATTCTCTCACGGCTGGGACGTTGTATTAAATGTTTAAACATTAACACA-GCAAAATCAC 3387
Query 46643 AATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTC 46702
|||| | || || || | | ||| || || || || ||||| || |||||||| || |
Sbjct 3386 AATGTAAACCCTCGTCACGAGAAATCAACTCATTGGAGAATGTAAGGCCAGGCATAAGAC 3327
Query 46703 CACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAG 46762
|||| || || ||||||||||| | || ||| ||| ||||| ||||| || ||||
Sbjct 3326 CACGTTTCTTTAGCCAAAATATCGAAGCAAAACTGCCACTGAAGAAAATGCCCTCCACAG 3267
Query 46763 CCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA----ATCCAC--CTTT 46816
| || ||||| | || | || || || |||| ||| ||| ||||| | ||
Sbjct 3266 CGGCAAATGCAATAATGCGTTCACCAAAATTGGCCG-ATTTTGAGCCAATCCAAGACATT 3208
Query 46817 GAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGt 46876
| ||||||| ||||| ||| ||| ||||| ||||| || |||||||||||| | |
Sbjct 3207 G--CCCAATCGGCCTTGCGCTTAACAGCTGGCATCGTTTCAATGGCATTAAAGAGATAAT 3150
Query 46877 ttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAA 46936
|| || | |||||||| || | || || |||| |||||||||||| || || |
Sbjct 3149 CGCGTTGTTCGCGATCTTTAATGTAGCTGTCGATCAAAATACTATACATTTCAGAGTGTA 3090
Query 46937 TGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTG 46996
||||| || || || || || || || ||||| | ||| || |||| |||||||||
Sbjct 3089 CATTTTCCATGGCAATTTGGAAACCATAGAAACAGCGTGCCTCTGTAACTTGTACCTCTT 3030
Query 46997 TACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCC 47055
|||| |||||| |||| ||| ||||| || || ||||| ||||||||| || |||
Sbjct 3029 GGGAAAAACGTTCA-ACAAGATTTTCATTGACAATACCATCGGAAGCAGCAAAGAAGGCC 2971
Query 47056 AATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCT 47115
| |||||| ||||| || |||| | || ||||| | |||||| |||||
Sbjct 2970 AGAACATGTGAGATAAAGTAACGCTCATTGTCGGTGAGTTTTTCCCAGTCCGAATTATCT 2911
Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159
|| || | |||||||||||| | ||||| || || || || ||
Sbjct 2910 TTAGAGAGATCTACTTCTTCTACAGTCCAAAAAGATGCTTCAGC 2867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 711174254083200
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