Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq197411 89.7 7e-13 seq148918 84.2 3e-11 >seq197411 Length=2406 Score = 89.7 bits (98), Expect = 7e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 63745 ATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTATG 63804 ||||| |||| || || || ||||||||| | | |||||| ||||| |||||||| Sbjct 592 ATACCGCAAATTGGCGACAAGTTTGCTTCTCGTCACGGTCAAAAGGGTACCTGTGGTATT 533 Query 63805 ATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATC 63864 ||||| |||||||||||| | ||||| || ||| | | |||||| | | || Sbjct 532 CAGTATCGCCAAGAAGATATGGCATTTACATGTGAAGGTTTAGCTCCCGATATTATTATT 473 Query 63865 AATCCACACGCTTTTCCCAGTCGTATGAC 63893 ||||| |||||| |||| ||||||||| Sbjct 472 AATCCTCACGCTATTCCATCTCGTATGAC 444 >seq148918 Length=2823 Score = 84.2 bits (92), Expect = 3e-11 Identities = 175/258 (68%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223 |||||| ||||||| ||| ||||| ||||||||||||||||| | || | || ||||| Sbjct 1996 AAACAAACGTCTGATGTTGGCTTCTGATTCACCCACATATTTATCCAAAATTTGTGGACC 2055 Query 156224 GTTAACTATTTTGACGGGTC---GTGATTTAAAAGCTTGAGCGATACAGCGAGCCATTAA 156280 ||||| || ||| || || | |||||| | || | | || ||| ||||| || Sbjct 2056 ATTAACAATCTTG--GGCTCTCTGGCATTTAACATATT-ACCAATTTGGCGGGCCATCAA 2112 Query 156281 TGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAA 156340 |||||||| || || || || || || || | || |||| || || || || || Sbjct 2113 AGTTTTACCAGTACCGGGTGGACCATACAATAAAATACCCTTTACGTGCTTGCACCCCAA 2172 Query 156341 TTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGA 156400 || ||| | ||| |||| || || ||||||||||||| || ||| | Sbjct 2173 TTGTTCTACCAACTCTGGTGGAAAGACTCGAGATGCAAATGCTCTTCTGAAGATGGCATT 2232 Query 156401 AAATTCTTTATCCAATCC 156418 || || || ||||| || Sbjct 2233 GAACTCCTTGTCCAAACC 2250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665428274715600