Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2324 100 6e-16 seq407 89.7 1e-12 seq1921 87.8 4e-12 seq259 86.0 1e-11 >seq2324 Length=154568 Score = 100 bits (110), Expect = 6e-16 Identities = 75/88 (85%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148 |||||||||||||| |||||||||||||||||||| ||||| ||||| | ||||| || Sbjct 82568 CAAGCATCAACATCAGAACTGTATGGAAAAGTTCATGAAATACCTCAGAAAGAAACAACA 82509 Query 61149 CCGTTTTATCCTCGTAGCCCGTATGGTG 61176 |||||||||||||| || ||||||| Sbjct 82508 CCGTTTTATCCTCGATCTCCATATGGTG 82481 >seq407 Length=487326 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 281742 GTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGA 281801 || ||||||||||| | || || ||||||||||| |||| ||||| ||||| || Sbjct 408034 GTAAAGATATACCTGGGGCTGGCAGCATCTTTACCACCTTGCAATCTCGAACCAAATTGG 408093 Query 281802 CCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACG 281861 || || |||| | || |||||||| || || || ||| || |||| || | | Sbjct 408094 CCAATGGGTTGCAACAAATTTATGTTATTACTACCAACAAAATTTTGTGCCAAATTAATG 408153 Query 281862 ATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCA 281921 ||||| | ||| || || ||||| ||||||||||| |||||| || || |||| Sbjct 408154 ATTGTAGACATAAGAGAAACTTCACCATGGTGATAGGCAGAGTGTTCTGCCACTGAACCG 408213 Query 281922 CTGAACTGTGCTACCTT 281938 |||||||| || || Sbjct 408214 GCCAACTGTGCAACTTT 408230 >seq1921 Length=289896 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||| || ||||| ||||||| ||||||||||||||| Sbjct 49832 TGCCCGGCTAGCTCAGTCGGTAGCGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 49773 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 49772 CCCCACGTTGGGC 49760 >seq259 Length=578514 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771 ||| ||||||||||| ||||||| | ||||| ||||||| | |||||||||||||||||| Sbjct 182972 CCGGCTAGCTCAGTCAGTAGAGCACGAGACTCTTAATCTCGAGGTCGTGGGTTCGAGCCC 183031 Query 165772 CACGATGGGC 165781 ||| ||||| Sbjct 183032 CACATTGGGC 183041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057703429220480