Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calopteryx_20splendens_20[genbank_20GCA_5F002093875.1_202017-04-14] 8,896 sequences; 1,628,352,544 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq664 105 6e-18 seq3317 98.7 9e-16 seq2870 91.5 1e-13 seq445 86.0 5e-12 >seq664 Length=484775 Score = 105 bits (116), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || ||||||||||||||| | ||| || |||||| | ||| |||||||| | || Sbjct 444054 TTCTGAATGTTGTAATCGGATAGAGTACGACCATCCTCTAACTGCTTTCCAGCAAAAATC 443995 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 | ||||||||| || || || || ||||||||||| ||| || ||| || | || Sbjct 443994 AAACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCCTGAATCTTGGCTTTCACGTTCTCA 443935 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | |||||| | | ||| || || | ||| | || || |||||||| || || ||||| Sbjct 443934 ATGGTGTCTGAGGGCTCTACTTCCAGGGTGATTGTCTTTCCGGTCAGCGTCTTCACAAAT 443875 Query 118731 ATCTGCAT 118738 |||||||| Sbjct 443874 ATCTGCAT 443867 >seq3317 Length=93551 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608 |||| || |||||||||||| || ||| || ||||||| | || |||||||| | | Sbjct 66989 CTTTCTGTATGTTGTAATCGGACAAAGTTCGATTATCCTCTAATTGCTTTCCAGCAAAAA 67048 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668 | | || || ||||||||||| || || || || ||| |||||| ||||| | || Sbjct 67049 TTAAGCGTTGTTGATCGGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTAACATTTT 67108 Query 118669 CGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727 | | ||||| | || | ||||| || | || | || || || ||||||||||| ||| Sbjct 67109 CAATTGTGTCAGATGAT-TCGACTTCTAAAGTAATTGTCTTTCCTGTCAGAGTTTTCACA 67167 Query 118728 AAAATCTGCAT 118738 || || ||||| Sbjct 67168 AAGATTTGCAT 67178 >seq2870 Length=135571 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608 |||||||||| ||||| || | |||||| ||| || | || || ||||| | | Sbjct 19950 CTTTTTGAATATTGTAGTCAGAGAGCGTGCGCCCATCTTCCAATTGCTTCCCAGCAAATA 19891 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668 | || | ||||||||| ||||| || || ||||| || ||| || ||| || | || Sbjct 19890 TAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTGGCTTTCACATTTT 19831 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 | | ||||| | | ||| || || | ||| | |||||| || || || ||||| || | Sbjct 19830 CAATTGTGTCAGAGGGCTCCACTTCCAGGGTAATCGTTTTACCCGTGAGCGTTTTCACGA 19771 Query 118729 AAATCTGCAT 118738 |||||||||| Sbjct 19770 AAATCTGCAT 19761 >seq445 Length=1857890 Score = 86.0 bits (94), Expect = 5e-12 Identities = 98/128 (77%), Gaps = 4/128 (3%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || |||| |||||||| || || | ||||||||| ||||||||||| || | || Sbjct 1798424 ACCACCACGTAGCCTCAACACTAAATGTAATGTAGACTCCTTTTGAATGTTATAGT--CT 1798481 Query 118571 CATAGTG-CGCG-TATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGA 118628 |||| | | | ||||||| ||||| |||||||| |||| | || |||||||| ||| Sbjct 1798482 GATAGAGTCTTGTTATCCTCTAGCTGCTTTCCAGCAAAGATCAATCGTTGCTGATCAGGA 1798541 Query 118629 GGTATGCC 118636 || || || Sbjct 1798542 GGGATACC 1798549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433783364108032